Wolbachia endosymbiont of Chrysomya megacephala: CAI20_03830
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Entry
CAI20_03830 CDS
T07637
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
wem
Wolbachia endosymbiont of Chrysomya megacephala
Pathway
wem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
wem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAI20_03830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wem03400
]
CAI20_03830
DNA repair and recombination proteins [BR:
wem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAI20_03830
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CAI20_03830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
nSTAND1
AAA_16
AAA_29
nSTAND3
RsgA_GTPase
DnaJ_CXXCXGXG
BCA_ABC_TP_C
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QEK89817
UniProt:
A0A5C0YLM0
LinkDB
All DBs
Position
800686..803499
Genome browser
AA seq
937 aa
AA seq
DB search
MIRVKGAREHNLQGIDVNIPKNKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYAR
QFLNIQDKPDVESITGLSPAISINQKSISKNPRSTVGTVTEIYDYLRLIYARIGIPYSPA
TGLPITKQTVSQIVDTITALPLETKVYIIAPIVRGRKGEHLKEILEIKKQGYVRLKINGE
ICDIDDLPKLDKNKKHDIFVIADRVSISDDIGNRLPSSIESALRLAHGLMYAEIVNLPDN
HNSEYKNGQTLTFSENFACPESGFTLEEIEPRLFSFNSPYGACSSCNGLGKKLSVDAKLI
VPDETLSISEGALKPIGSIFRQVHTNYGLLKNAILSLAENCKFSLDVPWKNIDQKVKDLI
LFGSREMKFQGLVSILERQMDYDSSLIDRYCSVTDCKECAGYRLRKEALTVKIDEKHIGE
ISGLSVDESLDWFENLPDKLTEQHKQISNKILNEIIKRLTFLKNVGLNYLTLDRESSTLS
GGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQCDNDRLIATLKNLRDMGNTVIVVEHDE
DTIMAADYVIDIGPGAGVNGGKVVAEGTPDQLQKNSESITGQYLSGKKEISISKRRKQTT
QFIKVVNACENNLKNINVEFPIGNFICVTGISGGGKSSLVIETLYKYSAHKINHSSARHG
QCDKIEGLEYIDKIIEVDQSPIGRTPASNPATYVGMFTHIRNWFAGLPESKARGYNIGRF
SFNTRGGRCEACKGDGHLKIEMHFLPDVYVKCEQCRGQRYNRETLEVTYKGKSISDVLDM
TIDQACDFFENLPMIKEKLISLQEVGLGYITLGQSSTTLSGGEAQRIKLSKELSKRFTGK
TLYILDEPTTGLHFEDVNNLLKILHRLVDLGNTVIVIEHNLHVIKTADYIIDIGPEGGVK
GGEVVAVGTPEKVAQTPKSVTGKYLKTYLLDQVSTIS
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgatcagagttaaaggtgcaagagagcataatttgcagggtattgatgtcaatatacca
aaaaataagttagttgttataactggactaagtggttctggtaagtctagcctcgcattc
gatacgatttatgcagaaggccaacgccgatacgtcgaaagtctatcggcttatgcacgt
caatttcttaatattcaagataaacctgacgttgaatcgatcacaggcctctctcctgca
atatcaattaaccaaaaatcgatctcaaaaaatccaagatcaactgttggaaccgttact
gaaatttatgactatctacgcttaatatatgcgcgaataggcattccttactcacccgca
actggattgccaataacgaaacagactgtatctcaaattgtagatactattacagcatta
cctttagaaactaaagtatatataattgctcctattgtacgtggtagaaagggagagcat
ctaaaagagatactggaaattaaaaagcagggttacgtaagactaaaaataaacggtgaa
atatgtgatatagatgacttgcctaagctcgataaaaacaagaaacatgatatttttgtg
attgcagatagagtgtccatatcagatgatataggaaatcgactaccaagcagtatagaa
tcagcattgagacttgcccatggcttaatgtatgcagaaatagttaacttacctgataac
cacaattccgagtataaaaatggtcaaactttaactttctcagagaattttgcatgtcct
gagtctggctttactcttgaagaaatagagccaagattgttttcttttaacagcccctac
ggtgcatgcagttcatgcaatgggctcggtaaaaagctaagtgttgatgcaaagctaata
gtgccagatgaaacgctctcgatatctgaaggtgctttaaagccaattggatcaatattc
cgtcaagtgcatacaaactatggattgctaaaaaatgcaattctgtcactggctgaaaat
tgcaaatttagtcttgatgttccgtggaagaatatagaccaaaaagtgaaggatttaata
ctttttggctctagagaaatgaaatttcaaggtttggtcagtatcctagaacgccagatg
gattacgattcatcacttattgataggtattgttctgttactgactgcaaagaatgtgct
ggctatagattgagaaaagaagcacttacagtgaaaattgatgaaaaacacataggtgaa
atatcagggctcagcgtcgatgaatcccttgattggtttgaaaatttgccagacaagctc
acagaacaacataagcaaatttcaaataaaatattaaacgaaataatcaaaaggctgaca
tttttaaagaatgtagggctaaattaccttacacttgaccgtgaatctagcactctctct
ggtggtgaaagccagaggatcaggcttgcttcgcaaattggctctggtttaacaggagtg
ctatacgtgcttgacgaaccctcaattggccttcatcaatgtgataatgatcgattaatt
gccacacttaaaaatctgagagacatgggtaatactgtgattgttgttgaacatgatgaa
gacacaataatggctgctgattatgtgattgatattggtcctggagctggtgtaaacgga
ggaaaagttgttgcagaaggaacaccagatcagttacaaaaaaattcagagagcataaca
ggacagtatttaagtggaaagaaggaaatttcaatttcaaaaagaagaaagcaaacaact
cagttcataaaggtagttaatgcttgtgagaacaacttaaaaaatataaatgttgaattt
cctatagggaattttatttgtgttactggaatatcaggaggagggaaatcaagtttagtg
atagaaacattatataaatactcagcacacaagataaatcattcatctgcaaggcatggt
caatgcgacaaaatagaaggccttgagtatatagataaaattatagaagttgatcaatcg
ccaattggtaggaccccagcatcaaatccagcaacatatgttggtatgtttactcacatc
agaaattggtttgcaggtctcccagagtcgaaggcacgaggttacaatataggccgattt
tcatttaataccaggggaggaagatgtgaagcttgtaaaggtgatgggcatttaaagatc
gagatgcatttcctaccggatgtttatgtgaaatgtgagcaatgtagaggacagaggtat
aaccgagaaacattggaagttacttacaagggaaaatcaatttctgatgtgcttgatatg
acaatagatcaagcatgtgacttttttgaaaatcttccaatgataaaggaaaagttgatt
tctttacaggaagtagggcttggctatataacgcttggacagtcgtcaacaacgttgtcc
gggggtgaagcacaacgaataaagctgtctaaggaactatcaaagcgatttaccgggaaa
acattgtatattctcgatgagccaacaactgggttacattttgaagatgtaaataattta
ctgaaaatactccataggctagttgatttaggaaatactgttatagttattgagcacaat
ttacatgttataaaaactgctgattacataatagatattggtccagagggtggagtaaaa
ggtggcgaagtggttgctgtaggaactccagaaaaagttgcacagactccaaaaagcgtt
acaggcaagtatcttaaaacatatttattggatcaagtatcgactatttcttaa
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