Wolbachia endosymbiont of Drosophila simulans wHa: wHa_07810
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Entry
wHa_07810 CDS
T02640
Name
(GenBank) Ribonuclease, Rne/Rng family protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
wen
Wolbachia endosymbiont of Drosophila simulans wHa
Pathway
wen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
wHa_07810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wen03019
]
wHa_07810
03009 Ribosome biogenesis [BR:
wen03009
]
wHa_07810
Enzymes [BR:
wen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
wHa_07810
Messenger RNA biogenesis [BR:
wen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
wHa_07810
Ribosome biogenesis [BR:
wen03009
]
Prokaryotic type
rRNA processing factors
wHa_07810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
TdIF1_2nd
Motif
Other DBs
NCBI-ProteinID:
AGK00210
LinkDB
All DBs
Position
complement(929071..930843)
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AA seq
590 aa
AA seq
DB search
MVNSGKRLLLIENSTCSNEVRVALSVNNKVVEFEQEFKEKKQLRGNIYVAYIKRIEPSLQ
AVFIEYGKNKQGFLSFSEISLDYFNIPEKEKETIFESYSNDDYTEKGNDTIANVSSDSAA
SKNVNESGSGFVREVPLYKKYKLQDVISVNQKVLVQLTKEERGNKGASFTTYITLVGRYC
VFMPNSMSKGGVSRRIEDANVRKQLKEILSSINLPKRSGLIVRTVGSGKNKKEIEQDYNY
LSSLWQSIQKNAFSVNVPSLIYNEADVIMRSVRDFCSDGIEVIVSGKEAFEAVRQYANNA
LKGSKLRYRLYRGYAPIFTYYGIEDQISELYSNRVELPSGGSLIITLTEAFVSIDVNSGK
MTGEDSIEETAYRTNMEAVPEISRQVNLRGLSGLIVVDFIDMLKYQYCRAVESAIKQAFK
DDKAKVQFSYINDFGLMVFSRQRIKPNIQEINTTECLHCKGTGRVKSNEVIVSSILRDLQ
HIANKNRNKFFDLVAHSAVIAHIFNNKRNTVSTIEKEFNITLNVSIDNSLDVNTFVLKQG
DDVNLNGYKPLQNSGYQIGDSSNEEADNSNKLRGNFWLTKWLSRLLSSNN
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaatagtggtaaaaggttattattgatagaaaattccacctgttctaatgaggta
agagttgccttgtcagttaataataaggttgtagaatttgaacaagaattcaaggaaaaa
aaacaattaagaggtaatatatacgttgcttatataaagcgtatagagccttctttgcaa
gccgtatttatcgaatatggaaaaaataagcaaggttttttgtctttttccgagatatct
ctagattacttcaatattccagaaaaagaaaaggaaactatctttgagagctactcaaat
gacgattatacagaaaaagggaacgataccatagcaaatgtctcttcagattctgcagct
agtaagaatgtcaacgagtcaggtagtggttttgtaagagaggtacctttatataaaaaa
tacaaattacaagatgttatttcagtaaatcaaaaagtattggttcagctaactaaagag
gaacgaggcaataaaggagcttcatttacaacatacataactttagtgggtagatactgt
gttttcatgccaaattccatgagtaaaggtggagtgtctcgcagaattgaagatgctaat
gtcagaaagcagttaaaggagatactgagttcaataaacttgccaaaaaggtcaggttta
atagtaagaactgttggttcaggaaaaaataagaaagaaattgagcaggattacaattac
ttatcctcattatggcagagcattcaaaaaaatgccttctctgtaaacgttccatcatta
atttacaatgaagcagatgtaattatgagatctgttcgtgatttttgtagcgatggtata
gaagttatagtgtctggaaaggaagcttttgaggcagttaggcaatatgctaacaatgca
ctaaaaggtagtaagttgcgctatagattgtatagaggttatgctccgatctttacttac
tacggaatcgaagatcaaatttctgagttatatagcaatagagtagaattgccatctggt
gggtctttgataataactttaactgaggcgtttgtttcaatagacgtaaattcaggaaag
atgacaggagaagatagcatagaagaaacagcttatagaaccaacatggaagcagtacct
gaaatatcaagacaggtgaatcttaggggcctatcaggattaatagtagtcgattttatt
gatatgttgaaatatcagtattgcagagctgttgagtctgctataaagcaagcgtttaaa
gatgataaagctaaagttcaatttagctacataaatgactttggtttaatggtattttca
agacaaagaattaaaccaaacatacaagaaattaatactacagagtgtttacactgcaaa
ggtactggaagagtaaaatcaaacgaagtaattgtttcatcaatactaagggatttacaa
catattgctaacaagaatcgaaataagttttttgatttagtagcacacagtgcagttata
gcgcacatttttaataacaaacgcaatacagtttctacaatcgaaaaagagtttaatatt
acattgaacgttagtattgataacagtttagatgtaaatacatttgttttaaaacaagga
gatgatgttaatttaaacggttataagccattacagaactctggataccaaattggggat
agcagcaatgaagaagctgataattcaaataaactacgaggcaatttttggctgactaag
tggctttcgcgccttttaagttctaataactaa
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