Wolbachia endosymbiont of Diaphorina citri: FK497_02175
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Entry
FK497_02175 CDS
T10388
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
wenc Wolbachia endosymbiont of Diaphorina citri
Brite
KEGG Orthology (KO) [BR:
wenc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FK497_02175 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wenc03021
]
FK497_02175 (rpoD)
Transcription machinery [BR:
wenc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FK497_02175 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_ner
Sigma70_r1_1
Sigma70_r1_2
Vps54
Sod_Ni
Motif
Other DBs
NCBI-ProteinID:
QLK11154
LinkDB
All DBs
Position
455074..456972
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AA seq
632 aa
AA seq
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MSTINDTEDRKKIIKDLVAKSMRKGGFITFDDINDKLSDENFSPDFIDDTIALLQDSGIN
ILESSEDEEEAPSNDGGNKLDDDETSLNTTTILVQNDDPVRIYLQDMSSVKLLSRADEIK
IAKKIESEKHNMLRAIIETSVAFNMIKTWRDDLSGGTFLLREIINLDAIYNSDFNMVDKE
ESEAEDVRDCVNDEEKGDDEKGNESEDISSANLNISVLEMESDLLPKVITALDEIIALTN
EALVLKKSSKDFSNELENLYNQIWSVALQIQFSDAAINRITQKLYEINRLITFKEANLIT
EARKYDIDRESFYNVYDDVLLEHEFSEISLLKINENQSLFTGELKNKFLRFINDSYEYIA
SALSNIKSYVQGDKVQEFKKLIKRIQKHEQEVSQAKQEMIKANLRLVVSIAKKYSKRGLD
LLDLIQEGNIGLMKAVDKFDYKRGYKFSTYGTWWVKQSITRAIPEQSKVVRIPVHMVEII
SKINKALRKMTHGMGREPTLEELSIELAMPIERIRKVMKIARDPVSLEAPTGKDDSSTFG
DCIEDKRVSKPEDAAILADLRGITTNVLATLTPKEERILRMRFGLGKDGKEHTLEEVGKI
FNVTRERIRQIEAKALRKLKHPSRAKKLRGFF
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactattaatgatacggaagataggaaaaaaatcatcaaagatcttgtagctaaa
agtatgagaaagggtggttttatcacttttgatgatataaatgataagttgtcagatgaa
aatttttcacctgattttatagatgatactatagctctattgcaagactctgggattaac
atactggaaagtagtgaagatgaggaagaagctccttctaatgatggtggtaataagctt
gatgatgatgagacatcgttgaatactactacaattttagtgcaaaatgatgatccagta
aggatttatttacaagatatgagctctgtaaagcttttgtcacgagcagatgaaattaag
atagcaaaaaaaattgaatctgaaaagcataacatgttacgtgcgataattgaaacatca
gtggcattcaacatgatcaaaacatggcgtgatgatttaagtggtggaacttttttgctg
agagaaattataaatctggatgcaatttataactctgatttcaacatggtagacaaagaa
gaaagtgaagctgaagatgttagagattgtgttaatgatgaggaaaaaggtgatgatgaa
aagggaaatgagagtgaagacataagttcagctaacttaaatatttctgttcttgaaatg
gaaagtgatttattgccaaaggttatcacggcattggatgagatcattgctttaacaaat
gaagcattggtattgaaaaaaagttctaaagatttctctaatgagctagaaaatttatat
aatcaaatatggtctgtagcattacaaattcagtttagtgatgctgctattaacagaatt
acacaaaaactttacgaaataaatagactaatcacgtttaaagaagctaatcttattact
gaagctagaaagtacgatattgatagagaaagtttttataatgtttatgatgatgtgctt
ttagagcacgagtttagtgaaataagtcttctcaagattaatgaaaatcaatctcttttt
acaggtgaattaaaaaataaattcttaaggtttataaacgatagctatgagtatatagct
agtgctttaagcaatattaagagttatgtacaaggagataaagttcaggagtttaagaag
ctaatcaagagaatacagaaacatgaacaagaagtctctcaagcaaagcaagaaatgatt
aaggctaatttaaggctggtggtttcgattgctaaaaagtattcaaaaagaggccttgat
ctgcttgatttgatacaagaaggtaatattggtcttatgaaggctgtggataagtttgat
tacaaacgtgggtataaattttcgacttatggtacttggtgggtaaaacaatcaatcact
agggcaatacctgaacagtctaaagtagttagaataccagtacatatggtggaaattatc
agtaaaatcaacaaagcattaagaaagatgactcatggaatgggtagagagcctacatta
gaggaattgagtatagaattggcgatgccgatagaaagaatacgcaaagttatgaagata
gcaagagatccggtaagtcttgaagctccaacaggaaaggatgatagtagtaccttcggt
gattgtatagaagataagcgagtttctaaaccagaggatgctgcaatacttgccgacttg
cgtggcattacgaccaatgttcttgcaactttaacaccaaaagaagaaagaattctaagg
atgcgctttggccttggtaaagatggaaaggagcataccttagaagaagtaggaaaaatt
tttaatgttacacgtgagagaattaggcaaatagaggcgaaagcactacgtaagttgaaa
catccaagccgtgctaaaaaacttaggggtttcttttaa
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