Wolbachia endosymbiont of Frankliniella intonsa: M3L71_02220
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Entry
M3L71_02220 CDS
T09319
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
wend
Wolbachia endosymbiont of Frankliniella intonsa
Pathway
wend03410
Base excision repair
wend03430
Mismatch repair
wend03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wend00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M3L71_02220 (recJ)
03430 Mismatch repair
M3L71_02220 (recJ)
03440 Homologous recombination
M3L71_02220 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wend03400
]
M3L71_02220 (recJ)
DNA repair and recombination proteins [BR:
wend03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
M3L71_02220 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M3L71_02220 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M3L71_02220 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WGJ62454
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Position
complement(384445..386181)
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AA seq
578 aa
AA seq
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MLLDIEKCSITNALWKLQEADQREIFTLIQRFELPEILARILVARGVNIENAHDFLHPLI
RSLLPDPFHLLDMDKAVSHIIKAINNNENIAIFGDYDVDGATSSALINRYLRAIGTHSII
YIPDRVDEGYGLNTDALLQLKKNGIDLCISVDCGTLAYQPIEDAKVFGLDIIVVDHHLGT
EKLPSAVAVVNPNRLDESSPYTNLAAVGVSFLLIVALNRSLREQGFFTNKKEPDLFDLLD
LVALGTVCDVMQITGLNRAFVLQGLKVMSARKNVGLRVLFDALGILEKPSVSRLGFSIGP
CINAGGRIGEASLGARLLSTDDDDAHSIALKLIDLNNARKMLENEAILEATTQAENFAHL
GVNFIMVSGNWHQGIIGIIASRLKEQFHLPTIVISLNNGIGKASCRSISGVDIGAAVLSA
KFTNLIIEGGGHSMAAGFSIKEDKISDLHDFFTERFANSTNDKIIKADGIVTAKAINLSL
WNQLQRLEPFGAGNPEPRLIIQGAKIRKPEVIGVDHIKCFIADDNVMVKAIAFRCANTEL
GSAIMQGNVKAILGKISMNYWNGNEFVQFLIEDVLTIS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgctacttgatattgaaaaatgcagcataacaaatgcactgtggaagttacaagaagca
gatcaaagggagatttttactcttatacagagatttgagttgccagaaatattagcaaga
atattagttgctcgtggtgttaacatagaaaatgcacatgacttcttacacccactaatc
agatcgctattaccagatccctttcacctccttgatatggataaagctgtttctcacata
ataaaagcaataaacaataatgagaatattgcaatatttggtgattacgatgttgatggt
gcaacgtcatcagcattgattaataggtacctaagagcgattgggacacactctataatc
tatattccagatcgtgttgatgagggctatggattgaacacagatgctttattacaactt
aaaaagaatggtattgatttatgtatttctgttgattgcggtacgcttgcatatcaacca
atagaagatgcaaaagtctttggacttgatattatagttgtcgaccatcaccttggaaca
gaaaaattaccaagtgctgtagcagttgttaatcccaaccgccttgatgagagctctcct
tatactaatcttgcagcagttggagtgtcatttctgctaattgttgctcttaatagaagc
ctacgtgagcaaggattttttaccaacaaaaaagaaccagatttatttgatctactggat
ttggttgctcttggaactgtttgcgatgttatgcagattacaggcctaaatagggctttt
gttttacaaggattaaaagttatgtcagcaagaaaaaatgttggcttacgtgttttgttt
gacgctttgggaatccttgaaaaaccaagtgtttcacgattagggtttagcattggaccg
tgcataaatgccggaggaagaattggagaagcatcgctcggtgcaaggttgctttccacc
gatgatgatgatgcacattcaatcgcgctaaaactaatagatttgaataatgcaagaaaa
atgctagaaaatgaggctattttggaagccacaacacaagcggaaaattttgcccactta
ggtgtaaattttataatggtaagtggtaattggcaccagggaataattggtatcattgca
tcaagactaaaggagcaatttcacttaccaacgatagtaatatctttaaataatggaata
ggaaaagcaagctgcagatcaatttctggggtagatattggtgctgcggttctttctgca
aaatttaccaacctaatcattgaaggtggtggtcacagtatggcagcaggattttcgatt
aaggaagataaaataagtgatctacatgatttctttactgaaagatttgcaaactctaca
aatgacaaaatcataaaagctgatggtatagtaacagctaaagcaataaacttatccctt
tggaatcaactgcagcgcttagagccatttggagctggcaatcctgaaccgagattaatc
attcaaggagcaaagataagaaagccggaagttataggagttgaccatataaaatgtttt
attgctgacgataatgttatggtcaaagctattgcgtttcgctgtgcaaatactgagctt
ggctctgctattatgcagggtaatgttaaagccattttgggtaaaatctctatgaattac
tggaatggcaatgaatttgtgcagtttttaatagaggatgtattgaccattagttga
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