Wolbachia endosymbiont of Ceratosolen solmsi: HUB95_04260
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Entry
HUB95_04260 CDS
T09951
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
weno
Wolbachia endosymbiont of Ceratosolen solmsi
Pathway
weno03410
Base excision repair
weno03430
Mismatch repair
weno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
weno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUB95_04260 (recJ)
03430 Mismatch repair
HUB95_04260 (recJ)
03440 Homologous recombination
HUB95_04260 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
weno03400
]
HUB95_04260 (recJ)
DNA repair and recombination proteins [BR:
weno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HUB95_04260 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HUB95_04260 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HUB95_04260 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QTP63197
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All DBs
Position
complement(868233..869972)
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AA seq
579 aa
AA seq
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MLLEIEKRSITNALWKLQEADQRQILTLTQRFELPEILARILVTRGVNIENASDFLYPLI
RSLLPDPFHLLDMDKAVSRIIRAMKNDENLAIFGDYDVDGATSSALINRYLRAIDIHSII
YIPDRVDEGYGLNTDALLQLKKNGIDLCISVDCGTLAYQPIEDAKAFGLDIIVVDHHLGT
EKLPSAVAVVNPNRLDESSPYNNLAAVGVSFLLIVALNKSLREQGFFTNKKEPDLFDLLD
LVALGTVCDVMQITGLNRALVSQGLKVMSTRKNVGLRVLFDALGILEKPSVSRLGFSIGP
CINAGGRIGEASLGARLLSTDDDEEAHSIALKLIDLNNARKVLENEALLEATAQAEKSAQ
SGANFIMISGNWHQGIIGIIASRLKEQFHLPTVVISLNNGIGKASCRSILGVDIGAAVLS
AKFINLIIEGGGHSMAAGFSIKEDKINDLHDFFTERFSNSINEKTLKADSIVTAKAINLS
LWNQLQRLGPFGVGNPEPRFIIQGAKIRKPEVIGVDHIKCFIADDNVMVRAIAFRSANTH
LGSAIMQGNVKAILGKISMNYWNGNEFVQFLIEDVLTIS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgctacttgaaattgaaaagcgcagcataacaaatgcattgtggaagttgcaagaagca
gatcaaaggcaaatcttaactcttacacagagatttgagttaccagaaatattagcaaga
atattggttactcgtggtgttaacatagaaaatgcaagcgacttcttatatccactaatc
agatcgctattaccagatccctttcaccttcttgatatggataaagctgtttctcgtata
atacgggcaatgaaaaatgatgaaaaccttgcaatatttggtgactatgatgttgatggt
gcaacgtcgtcagcattgattaacaggtacctgagagcaatcgatatacactctataatc
tacattccagatcgtgttgatgagggttatggattaaacacagatgctttattacaactt
aaaaagaatggaattgatttatgtatttccgttgattgtggtacgcttgcatatcaacca
atagaagatgcaaaggcttttggtcttgatattatagttgttgaccatcaccttggtacg
gaaaaattaccaagcgccgtagcagttgtgaatccaaaccgccttgatgagagctctcct
tataataacctagcagcagttggagtgtcatttctgctaattgttgctcttaataaaagc
ctacgtgagcaaggattttttaccaacaaaaaagaaccagatttatttgatctgttggat
ttggttgccctgggaactgtctgtgatgttatgcagatcacaggcctcaatagagcactt
gtctcacaaggattaaaagttatgtcaacaagaaaaaacgttggcttgcgtgttttattt
gatgctttgggaatccttgaaaaaccaagtgtttcgcggttggggtttagcattggaccg
tgcataaatgctggaggaagaattggagaagcatcgcttggtgcaaggttgctttccacc
gatgatgatgaagaggcacattcaatcgcgctaaaattaatagatttgaataatgcaaga
aaagtgttagaaaatgaggctctcttggaagctacagcacaagcggaaaagtctgcccaa
tcaggtgcgaattttataatgataagtggcaattggcaccagggaataattggtataatt
gcatcaaggctaaaggagcagtttcacttgccaacagtagtgatatctttaaataatgga
ataggaaaagcaagctgtagatcaattttgggagttgatatcggtgctgcagtcctttcc
gcaaagtttataaatttgattattgaaggtggtggccatagtatggcggcaggattttca
attaaagaagacaaaataaatgatttgcatgatttttttactgaaagattttcaaactct
ataaatgagaaaactttaaaagctgatagtatagtaactgctaaagcaataaatttgtct
ttatggaatcaattgcaacgcttgggaccatttggagttggaaatcctgaaccaaggttt
attatccaaggagcaaagataagaaagcctgaagttataggagttgaccatataaaatgt
tttattgctgatgataatgttatggtaagagctattgcatttcgttctgcaaatactcat
cttggctctgctatcatgcagggtaatgttaaagctattttgggtaaaatctctatgaat
tactggaatggcaatgaatttgtacaatttttaatagaagatgtattgaccattagttga
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