Wolbachia endosymbiont of Zygogramma bicolorata: WKH12_02310
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Entry
WKH12_02310 CDS
T11616
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
wenz Wolbachia endosymbiont of Zygogramma bicolorata
Pathway
wenz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
wenz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WKH12_02310 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wenz03400
]
WKH12_02310 (uvrB)
DNA repair and recombination proteins [BR:
wenz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WKH12_02310 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WKH12_02310 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Kinesin
Microtub_bd
UB2H
AAA_5
AAA_7
FBPase_glpX
Motif
Other DBs
NCBI-ProteinID:
XXB89346
LinkDB
All DBs
Position
complement(505565..507478)
Genome browser
AA seq
637 aa
AA seq
DB search
MKFQITTHFQPAGDQPQAIDSLIAGLNSNKRDQVLLGVTGSGKTFTMANVIARTNRPALI
MAHNKTLAAQLYEEMKGLFPNNAVGYFISYYDYYQPEAYLPQTDTYIEKDSAINDRIDML
RYSAVCSLLERRDTIVVASVSCIYGLGSPESYRSMTISLSVGDKIHVNDFLSNLADLQYK
RSDTRFERGYFRVRGDIIDIFPAYYENKAWRLSLLGDEIEEISEIDAITSNITKSLNTIT
IFPNSYHITSRETLLQTVELIKKELHECLDYYYLQNKIVEAKRLEQRTNFDIEMMRTTGI
CKGIENYSRYLYGMEAGDPPPTLFEYLPKDVILFVDESHVTVPQIGAMYSGNEARKKKLI
DYGFRLPSAFDNRPLKFEEWEKVRPQTIYISATPGKYELAKTNNVFIEQVIRPTGLTDPI
CIVKPIESQIDDVIHEAQVTIGKGFCVLITTLTKKMAENLAEYMSELNMRVSYLHSDIGA
LERIEIICKLRSKEIDVLVGVNLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIGRA
ARNAEGRVILYADKITGSLDRALRETERRRKKQEEHNILHNIVPKTIIKPISNTLQERAI
AEPKVNTNKDDLRKQMIEHAENLEFEEAARIKKLLQG
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcaaatcactacacattttcaacccgctggagatcaaccgcaggcaatcgat
agtttaattgcggggctaaatagcaataaaagagaccaagttttacttggggttactggt
tctgggaaaactttcactatggcaaatgttatagcaaggacaaacagacctgcgctgatc
atggcacacaataaaaccttagcagcacaactttatgaggaaatgaaaggattatttccc
aataatgctgttggatatttcatttcttattatgattactatcagcccgaagcttatttg
ccgcaaactgatacttatatcgaaaaagactctgcaatcaacgacagaattgacatgctg
cgttattctgccgtctgctccctcttggagcgcagggacacgatcgtagttgccagtgtt
tcttgcatatacggtcttggttcgcctgaaagctaccgcagcatgactatatctttaagt
gttggagataaaattcatgttaatgatttcttgagtaacttagctgatctccaatacaag
cgctctgataccaggtttgagagaggatatttcagagtgcgtggcgatattatcgatata
tttcctgcctattatgaaaataaagcttggcgtttatcgctgcttggtgatgaaatagaa
gaaatttctgaaattgatgctataacgagtaatattaccaaaagcctaaatacaatcacc
atttttccaaacagctatcacattacatcacgtgagactctgttgcagacagttgagcta
atcaaaaaagagctgcatgaatgcttggattattactacttgcaaaacaagattgttgaa
gcaaagcgcctcgagcaacgcactaattttgatattgaaatgatgaggacaacaggaata
tgtaaaggtattgaaaattattcgcgttatctctatggaatggaagctggggatccaccg
cctactttgtttgaatatttacccaaagacgtaattttatttgttgatgagagtcatgtc
accgttcctcagattggtgcaatgtacagtggtaatgaggcgcgtaaaaagaaattgatt
gactatggcttcaggctcccttccgcttttgataatcgtccattaaaatttgaagaatgg
gagaaagttaggccgcagactatttacatttcagctactcctggaaagtatgagttggca
aagaccaataacgtatttatagagcaagttattcgtccaacagggcttacagacccaatc
tgcattgtgaaaccaatagagagtcaaattgatgatgtaattcatgaggcacaagtgaca
ataggaaagggattttgtgttttaatcactacactgacaaaaaaaatggctgaaaattta
gctgaatatatgagtgaattaaatatgagagtgagttatttgcattctgatattggtgcg
ctggagagaatagaaattatatgtaaattaagatctaaagaaattgacgttttagtaggt
gttaacttgcttagggaaggtcttgatattccagagtgtggtttggttgcaattttagat
gctgataaagaaggatttttgcgatcagaaacatcgctcattcaaacgatcggtcgtgct
gcacgtaatgctgaaggtagagtaattttgtatgcagataaaatcactggttctttagat
cgtgcattaagagagactgaaagaagaagaaaaaaacaagaagaacataatatattgcac
aatattgtcccgaagactataataaaacctatatcaaacaccttacaggagagggcaata
gcagaaccaaaagtaaatactaataaggatgacttgagaaagcaaatgatagagcatgct
gaaaatttagagtttgaagaagcagcaagaataaaaaaattattgcaaggttaa
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