Wolbachia endosymbiont of Zygogramma bicolorata: WKH12_03545
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Entry
WKH12_03545 CDS
T11616
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
wenz Wolbachia endosymbiont of Zygogramma bicolorata
Pathway
wenz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wenz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WKH12_03545 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wenz03021
]
WKH12_03545 (rho)
03019 Messenger RNA biogenesis [BR:
wenz03019
]
WKH12_03545 (rho)
Transcription machinery [BR:
wenz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
WKH12_03545 (rho)
Messenger RNA biogenesis [BR:
wenz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WKH12_03545 (rho)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
AAA_25
AAA
OB_RNB
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
XXB88422
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All DBs
Position
complement(758349..759752)
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AA seq
467 aa
AA seq
DB search
MTTINEDVLAKGKVTAQPEKSEQIHNNDTVKQMVNEGTEKNRKTLDLSELKEKTAEELLE
LAEERKISTNGKSNGRMLKQEMIFSLMKKMSEEGGITTGSGIVEILPDGFGFLRSASANY
APSTDDVYISNGQIKKFNLRTGDMACGEIRPPGDKERYFTLTKVQSINSTEVSELRKYVH
FDNLLPLYPEESIVLECNSGDDKKGLSMRAIDIVAPLGKGQRALVVAPPRTGKTVLLQQM
ANSIAINHPEIELIVLLIDERPEEVTDMIRSVKGEVVSSTFDEPAYRHVQLAEIVIEKAK
RMVEHKKDVVILLDNITRLARAYNAVIPSSGKVLTGGVDSNALQRPKRFFGAARNIANGG
SLTIIATALIDTGSKMDEVIFEEFKGTGNAEIILDRKLSDKRIFPAIDITKSGTRKEELL
VDKAILNKIWVLRRILNPMGSVEAMEFLRDKLLLTKSNADFFNSMNH
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaatcaatgaagatgttttggcaaaaggaaaggttacagctcaacctgaaaaa
agtgagcaaattcacaataacgatacagtaaaacagatggtcaatgaaggtactgagaaa
aacagaaaaacattagatctgagcgaattaaaagagaaaacagcagaagaattgttagag
ttagctgaagaaagaaaaatttcaactaacggtaaaagcaatggtagaatgctaaagcag
gaaatgatattcagcttaatgaagaaaatgagcgaagaaggaggcataaccacagggagt
ggaatagtggaaatattgcctgatggttttggtttcttacgttcagcaagtgcaaattat
gccccaagtaccgatgatgtttatatttctaacgggcaaataaagaagtttaatttacgt
acaggagatatggcatgtggagaaataaggccacctggtgataaagaaagatattttact
ttaactaaggttcaaagtataaactctactgaagtcagtgaattaagaaagtacgtccat
tttgataatttgcttcctctttatcctgaggaaagcatagtacttgagtgtaatagtggt
gatgataaaaaaggcttaagcatgcgtgctatagatatagtagctcctcttggaaaaggg
caaagagcgttagtagttgctccacctcgcacaggaaaaactgtattgcttcagcaaatg
gctaactctatagctataaatcaccctgaaatagaattaatagtgttacttatagatgaa
agacctgaagaagtaacagatatgatacgttctgtaaaaggtgaggtagtgagttctacg
tttgatgagcctgcttaccgtcacgtacagcttgctgaaatagtaatagaaaaagctaaa
agaatggttgagcataaaaaagatgtggtaatcctacttgacaatattactagacttgca
cgtgcttataacgctgttattccttcgtctgggaaagttctaactggtggtgtggattca
aatgcactgcagagacccaagcgtttttttggagcggctcgtaatattgcaaatggtggt
tctttgacaatcatcgctacagctcttatagacactggttcaaaaatggatgaggttatt
tttgaagagtttaaaggtacaggaaacgctgagattatacttgatagaaaactttctgat
aaacgtatatttccagctattgacattacaaaatccggaacaaggaaggaagagctatta
gttgataaggctatactaaataaaatatgggtgttgcgtagaatactcaatcctatggga
tctgttgaagcaatggaatttttacgtgacaaactacttttaacaaagagcaatgctgac
ttttttaactccatgaatcactaa
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