Wolbachia endosymbiont of Folsomia candida: ASM33_01065
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Entry
ASM33_01065 CDS
T05726
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
weo
Wolbachia endosymbiont of Folsomia candida
Pathway
weo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
weo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASM33_01065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
weo03021
]
ASM33_01065
03019 Messenger RNA biogenesis [BR:
weo03019
]
ASM33_01065
Transcription machinery [BR:
weo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ASM33_01065
Messenger RNA biogenesis [BR:
weo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ASM33_01065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA
AAA_22
OB_RNB
NACHT
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
APR97910
LinkDB
All DBs
Position
273741..275156
Genome browser
AA seq
471 aa
AA seq
DB search
MATINDDVLTSEKITAKRESTKKNEQISDNDMIKQVTHEDNEKNIKTLDLSDLKARTVEE
LLQLTEERKVSANGKSNGRMLKQEMIFSLMKKMSEEGGITTGSGVVEILPDGFGFLRSAS
ANYAPSADDVYVSNGQIKKFNLRTGDIVCGELRPPGDKERYFTLTKVESINSAEVSELRK
YVHFDNLRPVYPEKRLILENNSSDDNRKDINMRAIDIVAPLGLGQRALIVAPPRTGKTML
LQQIATSISANHPEIELIVLLIDERPEEVTDMMRSVRGEVVSSTFDEPAYRHVQLAEMVI
EKAKRMVEHKKDVVILLDSITRLARAYNAVIPSSGKVLTGGVDSNALQRPKRFFGAARNI
ENGGSLTIIATALVDTGSKMDEVIFEEFKGTGNAEIILDRKLADKRIFPAIDITRSGTRK
EELLIEKAILNKIWVLRRILNPMGSIEAMEFLRDKLLLTKSNADFFNSMNN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaattaatgatgatgttttgacaagcgaaaagattacggctaagcgcgaatca
acaaagaaaaacgaacaaatttccgataacgatatgataaaacaagtaacacatgaagat
aatgaaaaaaatatcaaaacattagatttaagtgatttaaaagcaagaacagtagaagaa
ttattacaattgactgaagaaagaaaagtttcagctaatggaaagagtaacggcagaatg
ctgaaacaggaaatgatattcagcttgatgaagaaaatgagcgaggaaggaggcattact
acaggaagtggagtggtagaaatattgcctgatggttttggttttttacgctcagcaagc
gcaaattatgctcccagtgctgatgatgtttatgtttccaatggacaaataaagaaattt
aatttacgcacaggagatatagtctgcggagaattaaggccacctggtgataaagaaaga
tattttactttgactaaggttgaaagtattaattctgctgaggtgagtgagttaaggaag
tacgttcattttgataatttgcgtcctgtttatcctgaaaaaagattaatccttgaaaac
aatagcagcgatgataatagaaaagatataaacatgcgtgctatagacatagttgcgcct
cttggtctaggacaaagagcattaatagttgctccacctcgtactgggaaaacaatgtta
ctccagcaaatagctacttctatatctgcaaatcaccctgaaatagaattaatagtatta
ctaatagatgaaagacctgaagaagttacagatatgatgcgttctgtgagaggcgaggta
gtgagctctacatttgatgaacctgcttatcgccatgtacaacttgctgaaatggtaata
gaaaaagctaaaagaatggttgagcataaaaaagatgtggtcatcttactcgactctata
actcgtcttgcacgtgcttataatgcagttattccttcatctggaaaagtgttaactggt
ggtgtagactcaaatgcgctacaaagaccaaaacgtttttttggagcagcccgcaatata
gaaaatggcggttctttaacaatcattgctacagctttggtagacactggttcaaaaatg
gatgaggttatttttgaagaatttaaaggtacaggaaatgctgagatcattcttgataga
aaacttgctgataaacgaatatttccagctattgacattacgagatctggaactagaaag
gaagaattattgattgagaaagctatactcaataaaatatgggtgttacgtagaatactt
aaccctatgggatctattgaagcaatggagtttttacgtgataaattgcttttaacaaag
agtaatgctgacttttttaactctatgaataattag
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