Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
|
KO |
|
Organism |
weo Wolbachia endosymbiont of Folsomia candida
|
Brite |
KEGG Orthology (KO) [BR:weo00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:weo03032]
ASM33_05745 (gyrB)
03400 DNA repair and recombination proteins [BR:weo03400]
ASM33_05745 (gyrB)
Enzymes [BR:weo01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ASM33_05745 (gyrB)
DNA replication proteins [BR:weo03032]
Prokaryotic type
DNA Topoisomerases
ASM33_05745 (gyrB)
DNA repair and recombination proteins [BR:weo03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ASM33_05745 (gyrB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1053356..1055740
|
AA seq |
794 aa
MNNTYNADSIKILRGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDESLAGYCDKIE
ISINEDGSVSVSDNGRGIPTDIHEEEGISAAEVIMTQLHAGGKFDNNTYKVSGGLHGVGI
SVVNALSSWLELTIWRNKKEHFIRFENGDSMQPLKIVNENTNKRGTKVTFMPSTETFNGI
NFSFSTLEGRIRELAFLNSNISINLRDLRNKPPTESHFNQTDQSGGNFGTANFVQYLDKN
KTHVTKIASIKGNEEDLGISLEISMEWNDSYYENMLCFTNNIRQRDGGTHLAGFRSALTR
CINNYATNEGFLKKAKVSLTGEDVREGLTCVLSIKMPDPKFSSQTKDKLVSSEARAVVES
IVSDKLGTMLETDPKLAASIVERAIRSAKGREAARKARELVKSKNSIDIATLPGKLADCQ
EKSPALSELFIVEGNSAGGSAKQGRNRKTQAVLALKGKILNVERAGLDRIFSSAEIGSLI
TAIGAGIGSEHFDVEKVRYHKIIIMTDADVDGSHIRTLILTFFFRHMREIIDKGYLYIAQ
PPLYKVTKNAKDTYIKDDESFNDYIVNSAVKRLTLTGAAAGFDDLQFILNKCLDISNISK
NYDREIPQNLLESLIILSRKNALSSDEISKHLMLMYGEYTWEVEVKDEEREVHISKLFQG
LADKYIFALSMLESKEIQNILSSLDGIIGLFNGDSFLKSQETEIKITSPSALAKLIMDYG
KKGLTLQRFKGLGEMNADQLWDTTLNPEARTLLQVEIKDCEAADSIFSILMGDIVEPRRD
FINNNALNVHDVDI |
NT seq |
2385 nt +upstreamnt +downstreamnt
atgaacaatacttataatgctgactcgataaaaatattaaggggccttgatgccgtaaga
aaacgtccaggtatgtacatcggtgatactgatgacggatctggcttgcatcacatggtg
tatgaagttgttgataatgcaatagatgaatctttagctggatattgtgataaaattgaa
attagcattaatgaggatggatcagtatctgtgagtgacaatggtcgtggcattccaact
gatattcatgaagaagagggaatatcagcagcagaagtgataatgactcaactccatgcc
ggcggtaagtttgataacaatacctataaggtttccggtggtctgcatggtgttggaatt
tcagttgtgaacgcactatcaagctggttagagctcactatttggcgtaataagaaagaa
catttcattcgttttgaaaatggtgattctatgcagcctttaaaaatagtaaatgaaaat
acaaataaacgtggtactaaagtcacatttatgccatcaactgaaacttttaatggcatt
aactttagtttctcaactcttgaaggccgcataagggaattagcatttttaaattcgaat
atcagtattaatttacgtgatttgcgtaataaaccacctacagaatctcatttcaatcag
actgaccaatctgggggaaattttggtacagcaaattttgtacagtatttagataaaaat
aaaacacatgtaactaaaattgcaagcataaaaggtaatgaagaagatcttggtataagc
ctagaaatatcaatggagtggaatgattcctactatgaaaatatgctatgttttacaaat
aatatacggcaacgcgatggtggcactcatcttgcagggtttagatctgcattaactcgg
tgtatcaataattatgcaactaacgaaggttttttgaagaaggcaaaagtaagtttaact
ggagaggatgttagagaagggttaacttgtgttttatccattaaaatgcctgatcctaaa
ttttcttcacaaacaaaagacaagctggttagctcagaagcacgtgcagtcgtggaaagt
atcgtttctgataaattaggtacaatgcttgaaactgacccaaaattggcagcaagcatt
gtagaaagagcaattagatcagcaaaaggtagagaagctgcacgaaaggcacgtgaatta
gtaaaaagtaaaaacagtattgatattgcaactcttccgggaaagcttgctgattgccag
gagaaatctccagcattatcagagttatttatagtagaaggtaattcagcaggcggttcc
gccaaacagggtcgtaatcgcaaaacacaagctgtacttgctttaaaaggaaaaattctc
aatgtagagcgtgcaggtttagaccgtattttttcatctgcagaaattggttctctgatt
actgcaattggcgctggcataggaagtgaacattttgatgttgaaaaagttagatatcac
aagattattataatgacagatgcagatgttgatggatcacacatcagaactttgattcta
acatttttctttcggcatatgcgtgaaataattgacaagggatatttatatatagcgcag
ccgccgctctataaagttacaaaaaatgctaaagatacttatatcaaagatgatgaaagt
tttaatgattatatagtaaattcagcagttaagaggctaacactgactggtgcagcggct
ggattcgacgatttgcaattcattttgaataaatgcctagatatttcaaatattagtaaa
aattatgacagagaaataccacaaaatttgttggagtcgttgataattttaagcagaaag
aatgccctatcttctgatgagatatcaaagcatttaatgttaatgtatggtgaatacact
tgggaagttgaagtaaaagatgaagaaagagaggttcacatttctaaattgtttcaagga
ttggcggacaaatatatctttgcgcttagcatgcttgaaagtaaagaaatacaaaatata
ctcagctctcttgatggcataattggcttgtttaatggtgactcgtttttaaaatcacaa
gaaactgagataaaaattacatctccgagtgcgcttgcaaaattaattatggattacggt
aaaaaaggattaaccctgcagagatttaagggtcttggtgaaatgaatgctgatcaactg
tgggacactacattaaatcctgaagctagaactttgctacaagttgagataaaagattgt
gaagcagctgattccatattctcgatattgatgggtgatatagtcgaaccacgccgtgat
tttattaacaacaatgcgctcaatgtgcacgatgtggatatttaa |