Wolbachia endosymbiont of Anopheles demeilloni: JSQ73_001135
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Entry
JSQ73_001135 CDS
T07801
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
wep
Wolbachia endosymbiont of Anopheles demeilloni
Pathway
wep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JSQ73_001135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wep03019
]
JSQ73_001135
03009 Ribosome biogenesis [BR:
wep03009
]
JSQ73_001135
Enzymes [BR:
wep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
JSQ73_001135
Messenger RNA biogenesis [BR:
wep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JSQ73_001135
Ribosome biogenesis [BR:
wep03009
]
Prokaryotic type
rRNA processing factors
JSQ73_001135
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
UIP92970
LinkDB
All DBs
Position
216096..217853
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AA seq
585 aa
AA seq
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MASDGKRLLLIESTTCSNEVRVALLVNGRVVEFEQEFKEKRQLRGNIYVAYVKRIEPALQ
AVFIEYGKNKQGFLSFSEISLNYFNIPEKEKEIFPDEGYSSGVDCSNDNCTEEGLDSTAS
NESSSGFVREVPLHRKYKLQDVISVNQKLLVQLTKEERGNKGASFTTYVTLVGRYCVFMP
NSISRGGVSRRIEDTNVRKQLKDILNLINLPKGSGLIVRTVGAGKSKKEIEQDYDNLTLL
WQNIQQNFSSLNVPSLIYNEVDVVMRSVRDFCSNDTEIIVSDREVCEAVRKYTKNVLQGK
LRPRLYRGSVPIFTYYRVEDQISELYSNRVELPSGGSLVITLTEAFVSIDVNSGKMTGED
NIEETAYRTNMEALSEISRQANLRGLSGLIVVDFIDMLKLEYCKNVEFAIKQAFKDDRAK
VQFSFINDFGLMVFSRQRIKPNIQEINTTECLRCKGIGRVKSNEVVVASILRDLQHIANK
NQNKSFDLIARSAVIAHIFNNKRDMVSTIEKEFNITLNVSIDNSLDADTFILKQGDHINF
NDYKPFQNSGCQIVNSRDKEAGSSDTLPGNFWLTKWLSRLLGFNN
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
gtggcgagtgatggcaaaaggttattattgatagaaagtactacctgttctaacgaggta
agggttgccctactagttaatggtagggttgtagagtttgaacaagaattcaaggaaaaa
agacaattaagaggtaatatatacgttgcttatgtaaagcgtatagagcctgctttgcag
gccgtgttcattgagtatggaaaaaataagcaaggttttttgtctttttctgagatatct
ctaaattactttaatattccagaaaaagagaaggaaattttccctgatgaaggctattcg
agcggtgtggactgttcaaatgataattgcacagaagaaggcctagattctacagctagt
aatgaatccagcagtggttttgtgagggaggtacctttacatagaaaatataagttacaa
gatgtgatttcagtaaatcaaaagttattagttcaattaactaaagaagaacgaggaaat
aaaggagcttcatttacaacatacgtaactttggtcggtagatactgtgttttcatgccc
aattccataagtaggggtggagtatctcgcagaattgaagataccaacgttagaaaacag
ttaaaggatatattaaatttaataaatttaccaaaaggctcaggtttaatagtaagaact
gttggtgcaggaaaaagtaagaaagaaattgagcaagattacgataatttgaccttatta
tggcaaaatatccagcaaaacttctcttctttaaatgttccatcattaatttacaacgaa
gtagatgtagttatgagatctgtacgtgacttttgtagtaatgatacagaaattatagta
tctgatagagaagtttgtgaagcggtaagaaaatacactaaaaatgtgttacaaggaaaa
ttacgtcctaggttatatagaggctctgttccaatctttacttactatcgagtcgaagat
caaatttctgaattatatagcaatagagtagaattaccatctggtgggtctttggtgata
accttaactgaggcatttgtttcaatagacgtaaattcagggaaaatgacaggagaagat
aacatagaagaaacagcttatagaactaatatggaggcattatctgaaatatcaaggcaa
gcgaatctcaggggcttatcagggttaatagttgttgattttattgacatgttgaaactt
gagtattgcaaaaatgttgaatttgctatcaagcaggcgtttaaagatgatagagctaaa
gttcaatttagctttatcaatgactttggtttaatggtcttttcaagacaaagaattaaa
ccaaatatacaggaaattaatactacagagtgcttacgctgtaaaggtattggaagagtg
aaatcaaacgaagtggttgttgcatcgatactaagggatttgcaacatattgctaataaa
aatcaaaataagtcctttgatttaatagcacgcagtgcagttatagcgcacatttttaat
aataagcgtgatatggtttctacaatcgaaaaagagttcaatattacattaaatgttagt
attgataatagcttagatgcagatacatttattttaaagcaaggagaccatattaatttt
aatgattataagccattccagaattctggatgtcaaattgtgaatagcagggataaagaa
gctggtagttcagatacactaccgggcaacttttggttaactaaatggctttcgcgcctt
ttgggctttaacaactaa
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