Wolbachia endosymbiont of Anopheles demeilloni: JSQ73_001680
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Entry
JSQ73_001680 CDS
T07801
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
wep
Wolbachia endosymbiont of Anopheles demeilloni
Pathway
wep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JSQ73_001680 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wep03021
]
JSQ73_001680 (rho)
03019 Messenger RNA biogenesis [BR:
wep03019
]
JSQ73_001680 (rho)
Transcription machinery [BR:
wep03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JSQ73_001680 (rho)
Messenger RNA biogenesis [BR:
wep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JSQ73_001680 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
AAA
Spore_III_AA
OB_RNB
AAA_22
CutC
nSTAND_NTPase5
NACHT
Motif
Other DBs
NCBI-ProteinID:
UIP93056
LinkDB
All DBs
Position
complement(311797..313203)
Genome browser
AA seq
468 aa
AA seq
DB search
MTTINEDVLAKGEVVGQPEKSEQTHNADEVKQMTSEGAEKNKKTLDLSELKEKTAEELLE
LAEERKISTSGKGNGRMLKQEMIFSLMKKMSEEGGITTGSGVVEILPDGFGFLRSSSANY
APSTDDVYISNGQIKKFNLRTGDMACGKIRPPGDKERYFTLTKVQSINSTEISELRKYVH
FDNLLPLYPEKSLILENNSSRDNKKDINMRAVDIVTPLGKGQRALIVAPPRTGKTILLQQ
MAHSIATNHTEIELIVLLIDERPEEVTDMIRSVKGEVVSSTFDEPAYRHVQLAEIVIEKA
KRMVEHKKDVVILLDSITRLARAYNAVIPSSGKVLTGGVDSNALQRPKRFFGAARNIENG
GSLTIIATALIETGSKMDDVIFEEFKGTGNAEIILDRKLADKRIFPAIDITKSGTRKEEL
LVDKAILNKIWVLRRILNPMGSVEAMEFLRDKLLLTKSNADFFNSMNH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaatcaatgaagatgtcttagcaaaaggagaggttgtaggtcaacctgaaaaa
agcgaacaaactcataatgctgacgaagtaaaacaaatgaccagtgaaggtgctgaaaaa
aacaagaaaacattggacctgagcgaattgaaagagaaaacagcagaagaattgttagag
ctagctgaagaaagaaaaatttcaactagtggtaaaggcaatggcaggatgctaaaacag
gaaatgatattcagtttaatgaagaaaatgagtgaagaaggaggcataaccacaggaagt
ggagtagtggaaatattgcctgatggttttggtttcttacgttcatcaagtgcaaattat
gctccaagtaccgatgatgtttatatttccaatggccaaataaagaagtttaatttacgt
acaggagatatggcatgtggaaaaataaggccacctggtgataaagaaagatattttact
ttaactaaggttcaaagtataaactctactgaaatcagtgaattaagaaagtacgtacat
tttgataatttgcttccgctttatcctgaaaaaagcctcatccttgaaaacaacagtagc
agagataataaaaaagatataaacatgcgtgctgtagatatagttacacctcttggaaaa
ggacaaagagcattgatagttgctccacctcgtacaggaaaaacgatattgcttcagcaa
atggctcactctatagctacaaatcatactgaaatagaactaatagtattacttatagat
gaaagacccgaagaggtgacagatatgatacgctctgtaaagggtgaagtggtaagctct
acatttgatgaacctgcctatcgtcatgtccaacttgctgaaatagtaatagaaaaagct
aaaagaatggttgaacacaaaaaagatgtagtgattttgcttgattctataactcgcctt
gcacgtgcttataatgcagtcattccttcttctggaaaggttctaacaggtggtgtagat
tcaaatgcgctgcaaagaccaaaacgcttttttggagcagctcgtaatattgaaaatggt
ggttctttgacaatcattgctacagcccttatagaaactggttcaaaaatggatgatgtt
atttttgaagagtttaaaggcacaggtaatgctgaaattatactagatagaaaacttgct
gataaacgtatattccctgctattgatattacaaaatccggaacaaggaaggaagagcta
ttagttgataaggccatactaaataaaatatgggtattgcgtaggatacttaaccctatg
ggatctgttgaagcaatggagtttttacgtgacaaattacttttaacaaagagcaatgct
gacttttttaactccatgaatcactaa
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