Wolbachia endosymbiont of Aedes albopictus: NHG98_01420
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Entry
NHG98_01420 CDS
T08583
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
weq
Wolbachia endosymbiont of Aedes albopictus
Pathway
weq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
weq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NHG98_01420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
weq03019
]
NHG98_01420
03009 Ribosome biogenesis [BR:
weq03009
]
NHG98_01420
Enzymes [BR:
weq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NHG98_01420
Messenger RNA biogenesis [BR:
weq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NHG98_01420
Ribosome biogenesis [BR:
weq03009
]
Prokaryotic type
rRNA processing factors
NHG98_01420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
UVW84162
LinkDB
All DBs
Position
complement(287093..288856)
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AA seq
587 aa
AA seq
DB search
MANSGKRLLLIENSACFNEVRVALSVNNKVVEFEQEFKEKKQLRGNIYVAYVKRIEPSLQ
AVFIEYGKNKQGFLSFSEISLDYFNILEKEKETIFEGYSNDDCTEEAPANVSSDSAASKN
VNESGSGFVREVPLYKKYKLQDVISVNQKVLVQLTKEERGNKGASFTTYITLVGRYCVFM
PNSISKGGVSRRIEDANVRKQLKDILSSISLPKRSGLIIRTVGSGKNKKEIEQDYNYLSS
LWQSIQKNAFSVNAPSLIYNEADVIMRSVRDFCSDGIEVIVSGKEAFEAVRQYANNALKG
GKLRYRLYRGCVPIFTYYGIEDQISELYSNRVELPSGGSLIITLTEAFVSIDVNSGKMTG
EDSIEETAYRTNMEAVPEISRQVNLRGLSGLIVVDFIDMLKYQYCRAVESAIRQAFKDDK
AKVQFSYINDFGLMVFSRQRIKSNIQEINTTECLHCKGTGRVKSNEVIVASILRDLQHIA
NKNRNKSFDLVAHSAVIAHIFNNKRNTVSTIEKEFNITLNVNVDNSLDVNTFVLKQGDDV
NLNDYKPLQNSGYQIGDSSNEEVDNSNKLRSNFWLTKWLSRLLSSNN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaatagtggcaaaaggttattattgatagaaaattctgcctgttttaatgaggta
agagttgccttatcagttaataataaggttgtagaatttgaacaagaattcaaggaaaaa
aaacaattaagaggtaatatatacgttgcttatgtaaagcgtatagagccttctttgcaa
gctgtatttattgaatatggaaaaaacaagcaaggttttttatctttttccgagatatct
ctagattacttcaatattctagaaaaagaaaaggaaactatctttgagggctactcaaat
gacgattgtacagaagaagccccagcaaatgtttcttcagattctgcagctagtaagaat
gttaacgagtcaggtagtggttttgtaagagaggtacctttatataaaaaatacaaatta
caagatgttatttcagtaaatcaaaaagtattggttcagctaactaaagaggaacgaggc
aataaaggagcttcatttacaacatacataactttagtgggtagatactgtgttttcatg
ccaaattccataagtaaaggtggagtgtctcgtagaattgaagatgctaatgtcagaaag
cagttaaaggatatactgagttcaataagcttaccaaaaagatcaggtttaataataaga
actgttggttcaggaaaaaataagaaagaaattgagcaggattacaattacttatcctca
ttatggcagagcattcaaaaaaatgccttctctgtaaatgctccatcattaatttacaat
gaagcagatgtaattatgagatctgttcgtgatttttgtagtgatggtatagaagttata
gtgtctggaaaggaagcttttgaagcagttaggcaatatgctaacaatgcactaaaaggt
ggtaagttgcgctatagattgtatagaggttgtgttcctatctttacctactacggaata
gaagaccaaatttctgagttatatagcaatagagtagaattgccatctggtgggtctttg
ataataactttaactgaggcgtttgtttcaatagacgtaaattcaggaaagatgacagga
gaagatagtatagaagaaacagcttatagaaccaacatggaagcagtacctgaaatatca
agacaggtaaatcttagaggcctatcaggattaatagtagtcgattttattgatatgttg
aaatatcagtattgcagagctgttgagtctgctataaggcaagcgtttaaagatgataaa
gctaaggttcaatttagctacataaatgactttggtttaatggtattttcaagacaaaga
attaaatcaaatatacaagaaattaatactacagagtgtttacactgcaaaggtactgga
agagtaaaatcaaacgaagtaattgttgcatcgatactaagggacttacaacatattgct
aataagaatcgaaataagtcttttgatttagtagcgcacagtgcagttatagcgcacatt
tttaataacaaacgcaatacagtttctacaatcgaaaaagagtttaatattacattgaac
gttaatgttgataacagtttagatgtaaacacatttgttttaaaacaaggagatgatgtt
aatttaaacgattataagccattacagaactctggataccaaattggtgatagcagcaat
gaagaagttgataattcaaataaactacgaagcaatttttggctgactaagtggctttcg
cgccttttaagttctaataactaa
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