Wolbachia endosymbiont of Spodoptera picta: JKF54_01250
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Entry
JKF54_01250 CDS
T07615
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
wes
Wolbachia endosymbiont of Spodoptera picta
Pathway
wes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JKF54_01250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wes03019
]
JKF54_01250
03009 Ribosome biogenesis [BR:
wes03009
]
JKF54_01250
Enzymes [BR:
wes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
JKF54_01250
Messenger RNA biogenesis [BR:
wes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JKF54_01250
Ribosome biogenesis [BR:
wes03009
]
Prokaryotic type
rRNA processing factors
JKF54_01250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
QUI60603
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Position
298782..300539
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AA seq
585 aa
AA seq
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MASDGKRLLLIESTTCSNEVRVALLVNGRVVEFEQEFKEKRQLRGNIYVAYVKRIEPALQ
AVFIEYGKNKQGFLSFSEISLNYFNIPEKEKEIFPDAGYSSDVDCSNDNCTEEGLDSTAS
NESSSGFVREVPLHRKYKLQDVISVNQKLLVQLTKEERGNKGASFTTYVTLVGRYCVFMP
NSISRGGVSRRIEDTNVRKQLKDILNSINLPKGSGLIVRTVGAGKSKKEIEQDYDNLTLL
WQDIQQNFSSLNVPSLIYNEADVVMRSVRDFCSNDTEIIVSDREVCEAVRKYTKNVLQGK
LRPRLYRGSVPIFTYYRVEDQISELYSNRVELPSGGSLVITLTEAFVSIDVNSGKMTGED
NIEKTAYRTNMEALSEISRQANLRGLSGLIVVDFIDMLKLEYCKNVEFAIKQAFKDDRAK
VQFSFINDFGLMVFSRQRIKPNIQEINTTECLRCKGIGRVKSNEVVVASILRDLQHIANK
NQNKSFDLIARSAVIAHIFNNKRDMVSTIEKEFNITLNVSIDNSLDADTFILKQGDHINF
NDYKPLQNSGCQIVNSRDKEAGSSDKLPGNFWLTKWLSRLLGSNN
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
gtggcaagtgatggcaaaaggttattattgatagaaagtactacctgttctaacgaggta
agggttgccctactagttaatggtagggttgtagagtttgaacaagaattcaaggaaaaa
agacaattaagaggtaatatatacgttgcttatgtaaagcgtatagagcctgctttgcag
gccgtgttcattgagtatggaaaaaataagcaaggttttttgtctttttctgagatatct
ctaaattactttaatattccagaaaaagagaaggaaattttccctgacgcaggctattcg
agcgatgtggactgttcaaatgataattgcacagaagaaggcctagattctacagctagt
aatgaatccagcagtggttttgtgagggaggtacctttacatagaaaatataagttacaa
gatgtgatttcagtaaatcaaaagttattggttcaattaactaaagaagaacgaggaaat
aaaggagcttcatttacaacatacgtaactttggttggtagatactgtgttttcatgccc
aattccataagtaggggtggagtatctcgcagaattgaagataccaacgttagaaaacag
ttaaaggatatattaaattcaataaatttaccaaaaggctcaggtttaatagtaagaact
gttggtgcaggaaaaagtaagaaagaaattgagcaagattacgataatttgaccttatta
tggcaagatatccagcaaaacttctcttctttaaatgttccatcattaatttacaacgaa
gcagatgtagttatgagatctgtacgtgacttttgtagtaatgatacagaaattatagta
tctgatagagaagtttgtgaagcggtaagaaaatacactaaaaatgtgttacaaggaaaa
ttacgtcctagattatatagaggttctgttccaatctttacttactatcgagtcgaagat
caaatttctgaattatatagcaatagagtagaattaccatctggtgggtctttggtgata
accttaactgaggcatttgtttcaatagacgtaaattcagggaaaatgacaggagaagat
aacatagaaaaaacagcttatagaactaatatggaggcattatctgaaatatcaaggcaa
gcgaatctcaggggcttatcagggttaatagttgttgattttattgacatgttgaaactt
gagtattgcaaaaatgttgaatttgctatcaagcaggcgtttaaagatgatagagctaaa
gttcaatttagctttatcaatgactttggtttaatggtcttttcaagacaaagaattaaa
ccaaatatacaggaaattaatactacagagtgcttacgctgtaaaggtattggaagagtg
aaatcaaacgaagtggttgttgcatcgatactaagggatttgcaacatattgctaataaa
aatcaaaataagtcctttgatttaatagcacgcagtgcagttatagcgcacatttttaat
aataagcgtgatatggtttctacaatcgaaaaagagttcaatattacattaaatgttagt
attgataatagtttagatgcagatacatttattttaaagcaaggagaccatattaatttt
aatgattataagccattgcagaattctggatgtcaaattgtgaatagcagggataaagaa
gctggtagttcagataaactaccgggcaacttttggttaactaaatggctttcgcgcctt
ttgggctctaacaactaa
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