Wolbachia endosymbiont of Dipetalonema caudispina: GOY14_00440
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Entry
GOY14_00440 CDS
T08165
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
weu
Wolbachia endosymbiont of Dipetalonema caudispina
Brite
KEGG Orthology (KO) [BR:
weu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
weu03032
]
GOY14_00440 (topA)
03400 DNA repair and recombination proteins [BR:
weu03400
]
GOY14_00440 (topA)
Enzymes [BR:
weu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GOY14_00440 (topA)
DNA replication proteins [BR:
weu03032
]
Prokaryotic type
DNA Topoisomerases
GOY14_00440 (topA)
DNA repair and recombination proteins [BR:
weu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GOY14_00440 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
Mab-21_C
Motif
Other DBs
NCBI-ProteinID:
QKX00838
UniProt:
A0A7Z3DVN5
LinkDB
All DBs
Position
complement(114835..117285)
Genome browser
AA seq
816 aa
AA seq
DB search
MALLIVESPTKAKTIGKFLNKKFKVAASFGHIRDLPVKNGSVDPDNNFAIKYEIIEKAEK
YVKKLAKEASKTSDIYLATDPDREGEAIAWNIIEALKERKAINNKSNIYRVVFNEITKRA
VQEAIKNPRKINMDLVRAQQARRALDYLVGFNLSPLLWTKLSGSKSAGRVQSVVLKLICE
REDEISKFISQEYWSIKVKMQNSKSETFFAVLSHYNNKKLEKFSIKNQEEAKNLANEIKS
RQYIINIIDHKQVKRNPLPPFITSSLQQDAVSKLHLSVKDVMYIAQNLYEGINIGGETVG
LITYMRTDGFHIASEAITSIRKLIKLLYGDRYLPKFPHQYVKKIKNAQEAHEAIRPTDIN
RTPDSIKDYLTPEQFKLYDLIWKRTITSQMESVILNQMTVEISSTDQKVILQTSESSIFF
DGFYKIYKYNIDNKNESFLSIMKIGETCKLISVDSKQHFTQPPLRYSEASIVKKMEEIGI
GRPSTYTIIISVLQDRGYVILDNKRFIPSSRGKIVTIFLETFFRKCIEYNFTAQIEEKLD
LISNGCADWKKELSHFWVPFFNLVNSVKQMTHDEIFNGIHDLIVDWFYLKEEKKEIGKKC
SSCSDGTLKLNFGKAGIFLGCSNYPTCNYTKEIIASNDNSEYPRSLGIDEITGQEIMIKK
GPFGVYLESNNKSKRKKTGFIPKDMNINDINLITAIQLLSLPKIIGKHPNTEKKVKIGLG
RFGYYIFYDDKYFPLKKSSKEALKIQLNEAIQIIANNSQKWQKSLGLNKNGKEVFILSGR
YGFYIKIGRTKVALSKNIDIESINLKKALDLIKNKK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggcattattaatagttgagtcgcctacaaaagcaaaaacaataggtaagtttttaaat
aaaaaatttaaagtagctgcatcttttggacatataagagatcttccagtaaaaaatgga
tctgttgatccagataataattttgctataaaatacgaaatcatcgaaaaagcagaaaaa
tatgtgaaaaaattagctaaggaagcaagcaagacatctgatatataccttgcaacagat
ccagatagagaaggagaagcaatagcttggaatataatagaagcattaaaagaaagaaaa
gcaattaataataaaagcaatatttatagagtagtttttaatgaaataacaaaaagagca
gtacaagaggctattaaaaatccacgtaaaataaatatggatttagtacgtgcacagcag
gcacgtagagctttagattatctagtaggatttaatttatcaccactattatggactaag
ctgtcaggaagcaaatctgcagggagggtgcaatctgttgtacttaagcttatatgtgaa
cgggaagatgaaattagtaagtttatatcacaagaatactggagcataaaagtaaaaatg
caaaatagtaaaagcgaaacattttttgctgtactaagccactataacaataaaaaacta
gaaaagtttagtatcaagaatcaagaagaagcaaagaacttagcaaatgagattaaatca
cgacaatatatcataaatataatagatcacaaacaagttaaaaggaatccgttgcctcca
tttattacttcaagtcttcagcaagatgcagtaagcaagctacatttaagcgtgaaagat
gttatgtatatagcacaaaatttatatgaaggtatcaatatcggtggtgagactgtagga
ctgataacttatatgcgtacagatggattccatattgcaagcgaggctataacttcaatc
agaaagttgattaaattactatatggcgatagatatttaccaaagtttccccatcaatat
gtaaaaaagattaaaaatgctcaggaagcccatgaagcaattcgcccaactgacataaat
agaacaccagatagtattaaagactatttaacaccagagcaattcaaattatatgattta
atttggaaaaggactattacaagtcaaatggaatcagtgatccttaatcagatgacagtt
gaaattagttctactgatcaaaaagtaattttacaaacgagtgaatcaagcatatttttt
gatggtttctataaaatctataagtataatatagacaataagaatgaaagctttctatct
attatgaaaataggtgaaacttgtaagctaatttctgttgattcaaaacaacattttacc
caaccaccattacgttacagtgaagcaagtatcgtaaaaaaaatggaggaaattggtata
ggacgtccatcaacttatacgattattatttcagtattacaagaccgtggatacgttata
ctagataacaaaagatttattccaagcagtcgtggtaagattgttaccatatttttagaa
actttttttcggaagtgtatagaatataactttacagcacaaatagaagaaaaacttgat
ttaatttcaaatggatgtgcagattggaaaaaagaacttagccatttttgggtaccgttt
tttaatcttgtaaattctgtgaagcaaatgacgcatgatgaaatttttaatggaattcat
gatttaatagttgattggttttatctaaaggaagaaaaaaaagaaataggcaaaaaatgt
tctagctgttctgatggcacattgaaattaaactttggaaaagctgggatatttcttgga
tgttctaattatcctacatgcaattatacaaaagaaattattgccagtaatgataactct
gaatacccaagaagtttgggtatagatgagataactggacaagaaataatgattaaaaaa
ggtcctttcggagtttatttagaatctaataataagtcaaaaaggaaaaagacaggattt
atccctaaagatatgaacattaatgatattaatttaattactgctatacagttactttct
ttaccaaaaataatcggaaaacatcctaacactgaaaaaaaagtaaaaattggtcttgga
aggtttgggtactatattttttatgatgataaatattttcctctgaaaaaaagttccaaa
gaagcattaaaaatacagttgaatgaagctatacaaattattgcaaacaattcacaaaaa
tggcaaaaatctctcggacttaataaaaatggaaaagaagttttcattctcagtggtagg
tatgggttctatataaagattggtagaacaaaagttgctttgagtaagaacatagatatt
gaaagtataaatctaaaaaaggccttagatttaattaagaataaaaagtaa
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