Wolbachia endosymbiont of Dipetalonema caudispina: GOY14_01880
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Entry
GOY14_01880 CDS
T08165
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
weu
Wolbachia endosymbiont of Dipetalonema caudispina
Pathway
weu03030
DNA replication
weu03430
Mismatch repair
weu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
weu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GOY14_01880 (dnaE)
03430 Mismatch repair
GOY14_01880 (dnaE)
03440 Homologous recombination
GOY14_01880 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
weu03032
]
GOY14_01880 (dnaE)
03400 DNA repair and recombination proteins [BR:
weu03400
]
GOY14_01880 (dnaE)
Enzymes [BR:
weu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GOY14_01880 (dnaE)
DNA replication proteins [BR:
weu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GOY14_01880 (dnaE)
DNA repair and recombination proteins [BR:
weu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GOY14_01880 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
K1377
Motif
Other DBs
NCBI-ProteinID:
QKX01084
LinkDB
All DBs
Position
504701..508045
Genome browser
AA seq
1114 aa
AA seq
DB search
MFIHLRVHSIYSLLESSVTIEELICLCLQYKMPAVAITDSGNLFGSLEFAEYAASKGIQL
IIGCNIIVQHSKQNLPILLLAKNKQGYANLVTLVSESFKKRKSTNDISYINFTELLNLSS
GLIALTGGYDGILVQLLLKQDREMVEKLLLAFNGHLYVELQRHGLSKRLVEVEKTLLSFA
YKHNVPLVATNDVFFLNRSDYEAHVILTCISEGNYVLEENKKKTTTTTEHYFKSMIEMER
LFSDIPEAIHNTSVIARRCSYMPRSRQPILPKFPCRENKTENEELREQAIAGLKLRIASK
INIDLERYFNRLNYELGVITSMNYSGYFLIVSDFIRWSKINGIPVGPGRGSGAGSIVAWA
LQITDLDPIKFGLIFERFLNPDRVSMPDFDIDFCQEKRDLVIDYVRKKYGYVAQIITFGK
LQARAVLRDVGRVLQMPYIQVDKISKMVPFNPVNPVTLSQAIKLDRNLQKERDSDEVIAK
LLDISLKLEGIYRHISTHAAGIVICDQKLENFVPIYYDPSSALPITQYSMKYVEKAGLIK
FDFLGLGTLTLIDHVCHLIGRNGKKIDISLISLNDYKTYEMLSRGEAIGVFQLESSGMRE
ALIKLKPDCIEDIIALISLYRPGPINNISTYIARKHGLEKPDYIHPLLEETLKETFGVII
YQEQVMEIARILSGYSLAEADLLRRAMSKKIKEEMDKQRKFFVQGAIKNGIDYDRASHIF
DLVAKFAGYGFNKSHAAAYAVISYQTAYLKANYPLEFFTASMNLNISDRDKLNLFYYAAK
ICGVTILPPDINKSQALFSIEGEHIRYGIAALRNVGFSIAEGIVNMSQSIYQNIWEFIQN
SGHLINKRALESLIKAGVFDSIHKNRKQLYESIDTLIYFANKNRQNKESTQAVLFDNLDY
FKLKLEDVKDFNEEEKLEHELFSLGFYLTNHPLEKFRTLLEKLNIGFFRKNRTTKVAGII
LNVCMRTSEYGRFIILKLSDPDSIFEIAFYNNTIIERKRNLFLPRELVIIDLENSESTIK
LVGKDIFEFTKGITSIIKKLILIGCADSHKVAMELNSILKNRGKTKVMIELFLEKTKVSI
LLPDTYLITPQVAHEISNLSWVKDMKINTNSLLM
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgttcatacatctacgtgttcatagtatttattcgctacttgagagttcagttacaatt
gaggaattaatttgcctttgcttacagtataaaatgccagcagttgcgattactgattca
ggtaatttatttggctcacttgaatttgcagaatatgcggcaagtaaaggaatacagcta
ataataggatgtaatatcatagttcaacattcaaaacaaaatttacccatattactactt
gcaaaaaataagcaaggttatgctaacttagtcactctggtaagtgaatcttttaaaaag
cgtaaaagcactaacgatatttcttacattaattttactgagctattaaatttaagttca
ggtctaattgctttaactggtgggtatgatggaatattagttcaactgttattaaagcaa
gatagagaaatggtagaaaaattactcctggcattcaatggtcatttatacgttgaatta
caacgtcatgggcttagtaaaaggttagtagaagttgagaaaactttactaagctttgct
tacaagcacaatgtaccacttgttgcaacaaacgatgtattttttttaaataggtctgac
tatgaagctcatgttatattaacatgtatatcagaaggaaattacgttctcgaagagaat
aagaaaaaaacaactactactactgagcattattttaaatccatgatagaaatggagagg
ctatttagtgatattcctgaagcaattcataacacttcagtgatagctagaaggtgctct
tatatgccaagaagtaggcaacctattttgcctaaatttccttgtcgagagaataaaact
gagaatgaagaacttagggaacaagcaattgcaggattaaaattacgtattgcaagtaaa
ataaatatagatcttgagcgatattttaataggctaaattatgaattgggtgtgatcacc
tcaatgaattattctggatattttttgatagtttctgattttattcgttggagtaaaata
aatggcattccagttggtccaggaagaggttctggagctggatcaatcgtcgcttgggcc
ttacaaattacagatcttgatccaataaaatttggtttgatttttgaaagatttttaaac
cctgatcgtgtatcaatgcctgactttgatatcgatttttgtcaagaaaagagagactta
gttattgattatgtccgaaagaagtatggttatgttgctcaaataatcacttttggaaaa
ttacaagcaagggctgtgttacgtgatgttggtagggtactacaaatgccttatattcag
gtagataaaatatctaaaatggtcccatttaatccagtaaatcctgtaacgctgtcacag
gcaataaaacttgatagaaatttgcaaaaagaacgagacagtgatgaagtaattgcaaaa
cttcttgatatctctcttaaacttgaaggaatatatcgtcatatttcaactcatgctgct
ggaattgtgatatgtgatcaaaaattggaaaattttgttcctatttattatgatccaagt
tcagctcttccaattactcagtatagtatgaagtatgtggaaaaagctggactaataaaa
tttgattttctcggacttggtacgctaacactaatagatcatgtatgccatttaattggc
cgtaatggaaaaaaaattgatatttctttaatttctttaaatgactataaaacttatgaa
atgctttcaagaggtgaagcgatcggagtatttcaacttgaaagttcgggaatgagggag
gctttaattaaattaaaaccagactgtatcgaggatattattgctttaatctctctctat
cgtcctggtcctataaataatatttcaacttacattgcaagaaaacatggacttgaaaag
ccagattatattcatcccttgcttgaagaaacattaaaagaaacatttggagtaataatt
tatcaagagcaagtaatggaaatagcacgtattctttctggatatagcctggctgaagct
gatctacttaggcgtgctatgagtaagaaaattaaagaagaaatggataagcaacgcaaa
tttttcgttcagggggcaataaaaaatggtattgattatgatagggccagtcatattttt
gatcttgttgcaaaattcgctggttacggatttaataaatctcatgcagctgcatatgca
gtgatatcttaccaaacagcttatcttaaagctaattacccattagaattctttacagcc
tcaatgaatttaaacattagtgatagagacaaactaaatttgttttactatgctgcaaaa
atatgtggagtgactattcttccacctgatataaataaatcccaagctttattttcaata
gagggagaacacatacgatatggtattgctgctttgcgtaatgttggtttctctatagca
gagggaatagtcaatatgagtcaaagcatttatcaaaatatatgggaatttattcaaaat
tcaggacacttgataaataaaagagcactagaaagcttaattaaagctggagtatttgat
agtatacataaaaatagaaagcagttatatgagtcaatagatacactaatttattttgca
aataaaaatagacaaaataaagaatcaacccaagctgttttatttgataatcttgattac
tttaaactaaaacttgaagacgtaaaagactttaatgaagaagaaaaactggagcacgag
ttattttcactagggttttacttaactaatcatccgcttgaaaaatttagaacactttta
gaaaaattaaatattggattttttagaaagaatagaacaacaaaagttgccggtataata
ttaaatgtgtgtatgagaacttcagagtacggaagatttattatacttaagctttcagat
ccagattccatttttgagatagcattttataacaacacaataatagaaaggaaaagaaat
ttatttttgcccagagaacttgttataattgatcttgaaaattcagaaagtacaataaaa
ttagttggtaaggatatatttgaatttacaaaaggaatcacttctataattaaaaaacta
atcttaattggatgtgcagattcgcacaaagttgctatggaactaaattcaatattaaaa
aacaggggtaaaactaaagtaatgatagaactttttcttgaaaaaactaaagtaagtatt
ttattgccagatacatatttaattacccctcaggttgctcatgaaatatctaatttaagt
tgggttaaggatatgaagatcaatacaaatagcttgcttatgtaa
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