Wolbachia endosymbiont of Drosophila pseudotakahashii: ONI09_01930
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Entry
ONI09_01930 CDS
T08705
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
wev
Wolbachia endosymbiont of Drosophila pseudotakahashii
Brite
KEGG Orthology (KO) [BR:
wev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wev03032
]
ONI09_01930 (topA)
03400 DNA repair and recombination proteins [BR:
wev03400
]
ONI09_01930 (topA)
Enzymes [BR:
wev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ONI09_01930 (topA)
DNA replication proteins [BR:
wev03032
]
Prokaryotic type
DNA Topoisomerases
ONI09_01930 (topA)
DNA repair and recombination proteins [BR:
wev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ONI09_01930 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
SPOB_a
Motif
Other DBs
NCBI-ProteinID:
UZE38869
UniProt:
A0AA47A448
LinkDB
All DBs
Position
371661..374111
Genome browser
AA seq
816 aa
AA seq
DB search
MALLIVESPAKAKTIGKYLSKEFKVAASFGHVRDLPAKNGSVDPDNDFAIKYETIEKAEK
YIKELVKAASKTSDIYLATDPDREGEAMAWHVIETLKEKKAISNENNIYRVVFNEITKRA
VQEAIKNPREINMDLVRAQQARRALDYLVGFSLSPLLWTKLSGSKSAGRVQSVALKIICE
REDEISKFITQEYWSIKTEMQNSKDEAFFAMLSHYDNKKLEKFDIKNEEEAKNLVREIES
RQYAVSTVECKQVKRNPLPPFITSSLQQDAVNKLYFNVKNVMRVAQNLYEGIDIGGETVG
LITYMRTDGFHIADEAINSIRGSIKSLYGDKYLPQSPRKYVKKVKNAQEAHEAIRPTDIN
RTPGSIKDYLTPEQFKLYDLIWKRTIASQMESAILDQVVVEISSTDQKVVLRASGSSIFF
DGFYRVYQDNIEAENEGLLPAMKEGEACKLISVEPKQHFTQPPPRYSEASIVKKMEEIGI
GRPSTYATIISVLQDREYVSLDSKRFIPSSRGKIVTIFLETFFQRCVEYDFTAQMEEKLD
LISNGHADWKKELGHFWVPFFGHVNSVKQMTHDEVFSGIHDLVIDWFCSEEGKKEVNTKC
PDCLGGILKLNFGKAGVFLGCSNYPECDHTKEITGSNDNSEYPKSLGIDDITGQEVVIKK
GPFGLYLQFNNESEKKKAVSIPKDINVNDIDLSTATQLLSLPKVIGEHPETGKEVKIGLG
RFGYYIFYDGKYFSLKKSSKEVLNTELSETVQIIANSPRKELKSLGLNEKGKEVFICNGR
YGFYIKCGKTNVALGKSADIESIDLEKALELIKGKK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggcattattaatagttgaatcacctgcgaaagcaaagacaataggtaaatatttgagt
aaagagttcaaagtagctgcatcctttggacatgtgagagatcttccagcaaaaaacggt
tctgtcgatccggataatgattttgctataaagtatgaaaccattgaaaaagcagaaaag
tatataaaagagttagtaaaagccgcaagcaaaacatcagatatatatcttgcaacagac
ccagacagagaaggggaagcaatggcttggcatgtgatagagacattaaaagaaaagaaa
gcaatcagtaatgaaaacaacatttatagagtagtctttaatgagataacaaaaagagca
gtacaagaagcaataaaaaatccacgtgaaattaatatggatttagtgcgtgcacaacaa
gcacgtagagctttggattatctagttggatttagtttgtcaccactgctgtggacaaaa
ttgtcgggaagcaagtctgcagggcgagtgcagtctgttgcattaaagattatatgcgaa
cgagaagatgaaattagtaaatttataacacaggagtattggagcataaaaacagaaatg
caaaatagcaaagatgaggctttttttgctatgctaagccactatgacaataaaaagcta
gaaaaatttgatattaagaatgaagaagaagcaaagaacttagtcagggagattgagtca
aggcaatatgctgtaagcacagtagaatgcaagcaagttaagagaaacccgcttcctccg
tttattacttcaagtcttcagcaagatgcagtaaataagctgtattttaacgtgaaaaat
gttatgcgagtagcgcaaaatttatacgaaggtatcgatattggtggtgaaactgtaggg
ttgataacttacatgcgtacagatgggtttcatattgcagatgaggctataaactcaatt
agaggatcaattaagtcattatatggtgataaatatttaccgcagtctcctcgtaaatat
gtaaaaaaggtcaaaaatgctcaagaagcacatgaagcaattcgtccaactgatatcaat
agaacgccgggtagtattaaggattacttaacgccagagcaatttaaattgtatgattta
atctggaaaaggaccattgcaagtcaaatggagtcggcgatccttgatcaagtggtagtt
gaaattagttctactgatcaaaaagtagttctgcgagcaagtgggtcgagtatattcttt
gatggtttttatagagtctaccaagataacatagaagccgaaaatgaaggcctgctacct
gccatgaaggaaggggaagcgtgtaagctgatttcagttgagccaaaacaacatttcact
caaccgccacctcgttatagtgaagcaagtatcgtaaaaaaaatggaagaaatcggtata
ggtcgaccatcaacttatgcaacaattatttcggtattacaagatcgtgagtacgtttca
ttggatagcaaaaggtttattccaagcagccgcggtaaaatcgttactatatttttagaa
actttttttcagcgttgtgtagagtatgatttcacagcacaaatggaagagaagcttgat
ttaatttcaaatggacatgcagattggaaaaaagaattaggccacttttgggtgccattt
tttggtcatgtaaactctgtcaagcaaatgacgcatgatgaagttttcagcggcattcac
gatttggtaatcgattggttttgttcagaagaaggaaaaaaagaggtgaatacgaaatgt
cctgattgcttaggtggcatattgaaattgaactttggaaaagccggggtgttccttgga
tgttctaactatcctgaatgcgaccatacaaaagaaattacaggtagtaacgacaattca
gaatatccaaaaagtttaggtatagatgatataacaggacaagaggtagtaattaaaaaa
ggtccttttgggctttacctgcagtttaataatgagtcagaaaagaaaaaggcggtttct
ataccaaaagatataaatgttaatgatattgatctgagcaccgctactcagttactttcc
ttgccaaaagtaatcggagaacaccctgaaaccggaaaggaagtaaaaataggccttgga
cgatttggatactatattttctatgatggtaaatacttttctcttaagaaaagctccaaa
gaggtgctgaatacagaattgagcgaaaccgtacaaattattgcaaacagtccacgcaaa
gagttaaaatctctcgggcttaatgaaaaaggaaaagaagtttttatctgcaacggtagg
tacggattctatataaaatgcggtaaaacaaacgttgctttgggcaagagtgcagatatt
gagagtatagatctggagaaggctttagagttgattaagggtaagaagtag
DBGET
integrated database retrieval system
