Wolbachia endosymbiont of Wiebesia pumilae: HUB92_05540
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Entry
HUB92_05540 CDS
T07687
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
wew
Wolbachia endosymbiont of Wiebesia pumilae
Pathway
wew03030
DNA replication
wew03430
Mismatch repair
wew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUB92_05540 (dnaE)
03430 Mismatch repair
HUB92_05540 (dnaE)
03440 Homologous recombination
HUB92_05540 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wew03032
]
HUB92_05540 (dnaE)
03400 DNA repair and recombination proteins [BR:
wew03400
]
HUB92_05540 (dnaE)
Enzymes [BR:
wew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUB92_05540 (dnaE)
DNA replication proteins [BR:
wew03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUB92_05540 (dnaE)
DNA repair and recombination proteins [BR:
wew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUB92_05540 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
QTP62533
LinkDB
All DBs
Position
complement(1052234..1055563)
Genome browser
AA seq
1109 aa
AA seq
DB search
MFIHLRVHSVYSLLESSIKIEELIGLCLRNKMPAVAITDSGNLFGSLEFAEYAASRGIQL
IIGCNIIVKHSEQNLPILLLAKNEQGYTNLVTLVSESFRKRKNNSDIPYVDFDELLNLST
GLIALTGGCLAQLLLRQDKETVEKLLSAFNGHLYVELQRHGLNKELELEEALIDFAYQRN
IPLVATNDVFFPNRSDYEAYDILTCISEGSYALENNRKKLTTEHYFKSVAEMEELFSDIP
EAIHNTLVIAKRCSYMPRSRQPILPKFPCRENKTENEELREQAVAGLEFRIANETDIDLK
QYYDRLNYELSVITSMNYAGYFLIVSDFIRWSKANGIPVGPGRGSGAGSIVAWGLQITDL
DPIKFGLIFERFLNPDRVSMPDFDIDFCQEKRDLVIDYVQKKYGYVAQIITFGKLQARAV
LRDVGRVLQMPYSQVDKISKMVPFNPVNPVTLSQAIEFDQNLQKERDSDEVIAKLLDISL
KLEGIYRHVSTHAAGIVICDQKLENFVPVYYDPNSALPITQYSMKYVEKAGLIKFDFLGL
GTLTLIDHVCRLINRDGKKIDISSVSLNDQKTYEILSSGDSIGVFQLESSGMREALIKLK
PDCIEDIIALISLYRPGPMDNIPTYVARKHGLEKPDYIHPLLEEVLKETFGVIIYQEQVM
EIARILSGYSLAEADLLRRAMGKKIKEEMDKQRELFIQGATKNGVDYDRASYIFDLVAKF
AGYGFNKSHAAAYAVISYQTAYLKANYPLEFFTALMNLNIDDRDKLNLFYHAAKFSGVTV
LSPDINKSQAEFSIEDERIRYGIAALRNVGFSIAEGIVNVRSSACKDIWEFIQNSGHIIN
KRALESLIKSGAFDSVHKNRKQLYESMDTLIYFANKNKQDRESSQAALFGSLDVLKPKLE
NVEDFDEEEKLEHELFSLGFYLTNHPLEKFRTLLEKLNIGFIGENRTAKTAGVILNARMR
TSERGRFVILTLSDPHNVSEIAFYNNEIIEEKRDLFSPGTFVIIDLEASENTTRLAGKDI
SEFTKRVTSTIKELVLTTECTDSQKAAMELNTILKDEGRTKIMLKLLLEKHKVSILLPGA
YSIAPQVIYEISNLSWIKGVEINTNNLLI
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgttcatacacttgcgtgttcatagtgtttattcgctgcttgaaagctcgattaaaatt
gaggagctgatcggcctttgtttgcgaaataaaatgccagcggttgcaattactgattca
ggtaacttgtttggctcacttgaatttgcagaatatgcggcaagtaggggaatacagcta
ataataggatgcaatattatagttaaacattcagaacaaaatttacctatattattgctt
gcaaaaaatgagcaagggtacactaatttagtcactttggtgagtgagtcttttagaaag
cgcaagaataacagcgatattccttacgttgattttgatgagctattgaatttaagtacg
ggtctgatcgctttaaccggtggatgtttggctcaactattgttgaggcaagataaagaa
acggttgaaaaactgctttcagcattcaatggtcatttatatgttgaattgcagcgtcat
gggttgaataaagagctagagcttgaagaagctttgatagactttgcttatcagcgcaat
ataccactagttgcaacgaacgatgtgttttttccaaataggtctgactatgaggcttat
gatatattaacgtgtatatcggaggggagttatgccctggagaataacagaaagaagtta
actaccgagcattacttcaagtctgtggcagaaatggaggagctgttcagcgacattccc
gaagcaattcataacactttagtgatagctaagcggtgctcttacatgccaagaagcagg
cagcctattttgcctaaatttccttgtcgagaaaataaaactgagaatgaagaactgagg
gagcaggcagttgcaggattagaattccgtattgcgaatgagacagacatagaccttaaa
caatactacgatcggctgaattacgaactgagtgtgataacttcgatgaactacgctggc
tactttttgatagtttctgatttcattcgttggagcaaagcaaatggcattccagttggt
ccaggaagaggctctggtgctggatcaattgttgcttggggcttgcagattacagacctt
gatccaataaagtttggcctaatatttgaaagatttttgaatcctgatcgtgtatcgatg
cctgactttgatatcgatttctgccaagagaaaagggacctggttattgattatgttcag
aaaaagtacggttatgttgctcaaataatcacttttggaaaattgcaagcaagggcagta
ttgcgtgatgttggtagagtattgcaaatgccttactctcaagtggataaaatatctaaa
atggttccatttaatccagtaaatcctgtaactttatcacaagcgatagagtttgatcaa
aacctgcagaaagaacgagatagtgatgaggtaattgcaaagcttcttgatatatctctt
aagcttgaaggaatatatcgtcacgtttcaacccatgctgctggaattgtaatatgtgat
caaaagttggaaaattttgttcctgtgtattatgatccaaattcagctttgccaatcact
caatacagcatgaaatatgtggagaaagctgggctaataaaatttgattttcttggactt
ggtacgctaacgctaatagatcatgtatgtcgtttaattaatcgtgatggaaaaaagatt
gatatttcttcagtttctttgaatgatcaaaaaacctatgagatactctcaagcggtgat
tcaattggagtgtttcagcttgaaagttcgggaatgagagaagctttaattaaactaaaa
ccggactgcattgaagatattatcgctttaatttccctttatcgtccaggacctatggat
aacattccaacttatgttgcaagaaaacatggacttgaaaagccagattatattcatccg
ttacttgaggaagtattaaaagagacatttggggtaataatttaccaagaacaagtgatg
gaaatagcccgtattctttccgggtatagcttagcggaagcagatttgctgagacgtgct
atgggtaagaaaatcaaggaagagatggataaacaacgtgaacttttcatccaaggggca
acgaagaatggcgttgattacgacagggcaagttatatctttgaccttgttgcaaaattt
gctggttatgggttcaataaatctcatgctgcagcatatgcggtgatatcttatcaaacg
gcttaccttaaagctaattatccattagaattttttacagcactaatgaatctgaatatt
gatgatagagataaactgaatttattttatcatgcagcaaagtttagtggcgttaccgtt
ctttcacctgatataaacaagtctcaagctgaattctcaatagaggatgaacgcatacgt
tatggtattgctgccttgaggaatgttggtttttctatagcggaaggaatagtgaacgta
cgttcaagcgcttgtaaggacatatgggaattcattcaaaattcaggtcatataataaat
aagagagcgctagaaagcctgattaaatccggagcattcgatagcgtgcataagaacaga
aagcagctatatgagtcaatggacacgctgatttactttgcaaataaaaacaaacaggat
agagaatcaagtcaagctgctttgtttggtagtcttgatgtcctcaaaccgaaacttgag
aatgtggaagattttgatgaagaggaaaaattagaacatgagttattttcactaggattt
tatttaactaatcatccgcttgaaaaatttagaactcttctggaaaagttaaatattggg
tttatcggagaaaatagaacagcaaaaactgctggggtaatattaaatgcacgtatgaga
acttcagagcgtggaaggtttgttatcctcacactttctgatccccataacgtttctgaa
atagcattctataataatgaaataatagaagaaaaaagagatttattttcaccaggaaca
tttgtgataattgatcttgaagcttcggaaaatacaacaagattagcaggcaaggatata
tctgagtttacaaaaagagtcacttctacaataaaagaattagttctcaccactgagtgc
acggattcgcaaaaagccgctatggaattaaacacaatattgaaagatgaaggcagaacc
aaaataatgctaaaacttcttctcgaaaaacataaagtgagcatcttattaccaggtgca
tactcaattgctcctcaagtaatttatgaaatatctaatttaagctggattaaaggcgta
gaaattaatacaaataacttgcttatataa
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