Wolbachia endosymbiont of Wiebesia pumilae: HUB92_06160
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Entry
HUB92_06160 CDS
T07687
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
wew
Wolbachia endosymbiont of Wiebesia pumilae
Brite
KEGG Orthology (KO) [BR:
wew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
wew03016
]
HUB92_06160
Enzymes [BR:
wew01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HUB92_06160
Transfer RNA biogenesis [BR:
wew03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HUB92_06160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DUF2251
Motif
Other DBs
NCBI-ProteinID:
QTP62384
LinkDB
All DBs
Position
complement(1173497..1174675)
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AA seq
392 aa
AA seq
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MLISTTSELENTCEELIAKKPKFIAVDTEFIRNNLIYYPKLSLIQISYGEKSFIVDALVP
EIDLSFIKKIMLNQGITKVFHSCRQDIESLLTVFKCIPTPIFDTQVAAMFCHYYHDFIGY
SKVVEQYQGIALDKIKAKNSDWLRRPLSEDQLDYAVNDVVHLYDLYQILCNKLEENNRMG
WFQEEMESIVDINKYLHSPKDAWKRIKFNYEVNPRLILTVKAVSEWQETLAQRYNMNRNK
IINNAVIADFIEKNVEHVDEILDDLKRNTKNIKDADLLEFVNIFNENERNWMQQNNTLSS
NYDKSVLDILSIILDSKCKESNISRKLVSSKDELTGSISGQTDKLFKGWRYDFFGRSVES
FLNTSSKFEISAVKSANNITKIQSNLVENNCC
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgctaattagtacaacatcagaactggagaatacatgtgaagagttaatagcaaaaaag
ccgaaatttatagcagttgacacggagttcattagaaataatttaatctactacccaaaa
ttatcgttaattcaaatttcttacggagagaagagttttattgtagacgcattagtgcca
gaaattgatttatcattcattaagaaaataatgctaaatcaggggataaccaaagtgttt
catagctgccggcaggatatagaatccttactcactgtgtttaaatgtattcccactccc
atttttgatacccaagttgctgctatgttttgtcattattatcatgactttattggttac
tcaaaagtagtggagcaatatcaaggaatagcactggataaaattaaagctaaaaattca
gattggttaaggcgtccgttgtccgaagatcagttagattatgcagtaaacgacgtggta
cacctatatgacctataccaaatattgtgcaataaacttgaagaaaataataggatgggt
tggtttcaagaagagatggaatcaatagttgatataaataagtatttacatagcccaaaa
gatgcatggaagaggattaaatttaattatgaagtaaatccaagattgatactaactgtt
aaagcagttagtgagtggcaagaaaccttagcacagcgctataatatgaaccgtaataaa
ataatcaataatgctgtaatagctgattttattgaaaaaaatgtagagcatgttgatgag
attttagatgatctcaagaggaatacaaaaaatataaaagatgcggatttactagagttt
gtgaatatttttaatgaaaatgagagaaattggatgcagcaaaacaacaccttatcgagt
aattatgacaaatctgtacttgatatactctcaattattttagatagtaaatgtaaagaa
agtaacatatcaaggaaattagtttcttcaaaagatgagttaaccgggtcaatatctgga
cagacagataaattattcaagggatggagatatgatttttttggcaggtcagttgaatca
tttttgaacacaagctcaaaatttgagatttcagcagtgaaatccgcaaataatataacc
aaaattcagagtaatttagtggagaataactgttgctaa
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