Wolbachia endosymbiont of Drosophila yakuba: wYak_08180
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Entry
wYak_08180 CDS
T07657
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
wey
Wolbachia endosymbiont of Drosophila yakuba
Brite
KEGG Orthology (KO) [BR:
wey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wey03032
]
wYak_08180 (topA)
03400 DNA repair and recombination proteins [BR:
wey03400
]
wYak_08180 (topA)
Enzymes [BR:
wey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
wYak_08180 (topA)
DNA replication proteins [BR:
wey03032
]
Prokaryotic type
DNA Topoisomerases
wYak_08180 (topA)
DNA repair and recombination proteins [BR:
wey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
wYak_08180 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
SPOB_a
Motif
Other DBs
NCBI-ProteinID:
QVU15980
LinkDB
All DBs
Position
929286..931736
Genome browser
AA seq
816 aa
AA seq
DB search
MALLIVESPAKAKTIGKYLSKEFKVAASFGHVRDLPAKNGSVDPDNDFTIKYETIEKAEK
YIKELVKAASKTSDIYLATDPDREGEAMAWHVIETLKEKKAISNENNIYRVVFNEITKRA
VQEAIKNPREINMDLVRAQQARRALDYLVGFSLSPLLWTKLSGSKSAGRVQSVALKIICE
REDEISKFITQEYWSIKAEMQNSKDEAFFAMLSHYDNKKLEKFDIKNEEEAKNLVREIES
RQYAVSTVERKQVKRNPLPPFITSSLQQDAVNKLYFNVKSVMRIAQNLYEGIDIGGETVG
LITYMRTDGFHIADEAINSIRGSIKSLYGDKYLPQSPRKYVKKVKNAQEAHEAIRPTDIN
RTPGSIKDYLTPEQFKLYDLIWKRTIASQMESAILDQVVVEISSTDQKVILRASGSSIFF
DGFYRVYQDNIEAENEGLLPAMKEGEACKLISVEPKQHFTQPPPRYSEASIVKKMEEIGI
GRPSTYATIISVLQDREYVSLDSKRFIPSSRGKIVTIFLETFFQRCVEYDFTAQMEEKLD
LISNGHADWKKELGHFWVPFFGHVNSVKQMTHDEVFSGIHDLVIDWFCSEEGRKEVNTKC
PACLGGILKLNFGKAGVFLGCSNYPECNHTKEITDSNDNSEYPKSLGIDDITNQEVMIKK
GPFGLYLEFNNELKKKKTVSIPKDINVNEIDLSTATQLLSLPKVIGEHPETGKEVKIGLG
RFGYYIFYDGRYFSLKKSSKEVLNTELSEAVQIIANSPRKELKSLGVNEKGKEVFICNGR
YGFYIKCGKTNVALGKSADIESIDLEKALELIKGKK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggcattattaatagttgaatcacctgcgaaagcaaagacaataggtaaatatttgagt
aaagagttcaaagtagctgcatcctttggacatgtgagggatcttccagcaaaaaacggt
tctgtcgatccggataatgattttactataaagtatgaaaccattgaaaaagcagaaaag
tatataaaagagctagtaaaagccgcaagcaaaacatcagatatatatcttgcaacagac
ccagacagagaaggggaagcaatggcttggcatgtgatagagacattaaaagaaaagaaa
gcaatcagtaatgaaaacaacatttatagagtagtctttaatgagataacaaaaagagca
gtacaagaagcaataaaaaatccacgtgaaattaatatggatttagtgcgtgcacaacaa
gcacgtagagctttggattatctagttggatttagtttgtcaccactgctgtggacaaaa
ttgtcgggaagcaagtctgcagggcgagtgcagtctgttgcattaaagattatatgcgaa
cgagaagatgaaattagtaaatttataacacaggagtattggagcataaaagcagaaatg
caaaatagcaaagatgaggctttttttgctatgctaagccactatgacaataaaaagcta
gaaaaatttgatattaagaatgaagaagaagcaaagaacttagtcagggagattgaatca
aggcaatatgctgtaagcacagtagaacgcaagcaagttaagagaaacccgcttcctccg
tttattacttcaagtcttcagcaagatgcagtgaataaactgtattttaatgtgaaaagt
gttatgcgcatagcgcaaaatttatatgaaggtatcgatattggtggtgaaactgtaggg
ttgataacttacatgcgtacagatgggtttcatattgcagatgaggctataaactcaatt
agagggtcaattaagtcattatatggtgataaatatttaccgcagtctcctcgtaaatat
gtaaaaaaggtcaaaaatgctcaagaagcacatgaagcaattcgtccaactgatatcaat
agaacgccgggtagtattaaggattacttaacgccagagcaatttaaattgtatgattta
atctggaaaaggaccattgcaagtcaaatggagtcggcgattcttgatcaagtggtagtc
gaaattagttctactgaccagaaagtaattctgcgagcaagtggatcaagtatatttttt
gatggtttttatagagtctaccaagataacatagaagccgaaaatgaaggcctgctacct
gccatgaaggaaggggaagcgtgtaagctgatttcagttgagccaaaacaacatttcact
caaccgccacctcgttatagtgaagcaagtatcgtaaaaaaaatggaagaaatcggtata
ggtcgaccatcaacttatgcaacaattatttcggtattacaagatcgtgagtacgtttca
ttggatagcaaaaggtttattccaagcagccgcggtaaaatcgttactatatttttagaa
actttttttcagcgttgtgtagagtatgatttcacagcacaaatggaagagaagcttgat
ttaatttcaaatggacatgcagattggaaaaaagaattaggccacttttgggtgccattt
tttggtcatgtaaactctgtcaagcaaatgacgcatgatgaagttttcagcggcattcac
gatttggtaatcgattggttttgttcagaagaaggaagaaaagaggtgaatacgaaatgc
cctgcttgcttaggtggcatattgaaattgaactttggaaaagccggggtgttccttgga
tgttctaactatcctgaatgcaaccatacaaaagaaattacagatagtaacgacaattca
gaatatccaaaaagtttaggtatagatgatataacaaaccaagaagtgatgatcaaaaag
ggtccttttggactttatctggagtttaataacgagttaaaaaagaaaaaaacggtttcc
ataccaaaagatataaatgttaatgagattgatctgagcaccgctactcagttactttcc
ttgccaaaagtaatcggagaacaccctgaaaccggaaaggaagtaaaaataggccttggg
cgatttgggtactatattttctatgatggtagatacttttctcttaagaaaagctccaaa
gaggtgctgaatacagaattgagcgaagctgtacaaattattgcaaacagtccacgcaaa
gagttaaaatctctcggggttaatgaaaagggaaaagaagtttttatctgcaacggtagg
tacggattctatataaaatgcggtaaaacaaacgttgctttgggcaagagtgcagatatt
gagagtatagatctggagaaggctttagagttgattaagggtaagaaatag
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integrated database retrieval system
