Wenzhouxiangella sp. AB-CW3: IC757_04195
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Entry
IC757_04195 CDS
T08427
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
wez
Wenzhouxiangella sp. AB-CW3
Pathway
wez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IC757_04195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wez03019
]
IC757_04195
Enzymes [BR:
wez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IC757_04195
Messenger RNA biogenesis [BR:
wez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IC757_04195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
Utp25_C
CMS1
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QOC23354
UniProt:
A0A7H4GPP2
LinkDB
All DBs
Position
981984..983276
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AA seq
430 aa
AA seq
DB search
MTDNSSPQQVLTETRFDQFDLFPAIRQGLLDAGFECCTPIQASTLPLTLSGRDVAGQART
GTGKTAAFLLTVFQRLLSDDSVGPGPNPRSIIIAPTRELAIQIHRDAELLGKHTGLRTVL
TYGGVDYARQREQIASGVDILIGTPGRLIDYFKQGVYNLKHIEVVVLDEADRMFDLGFIK
DIRYLFRRMPPVDKRQTLMFSATFPLKVTELAYEHMNDAETIRFEEEQVTSDRVTQVVYY
PANREKLPLLVKLLRGMEDGHVMVFVNTRHQTDRVARTLKANGINAAMLAGNVPQKKRQS
LLKRFHDGEIDVLVATDVAARGLHIPDVSHVINFDLPQDAADYVHRIGRTARLGATGDAI
SFACEDYAFHLPEIEEYIEMPLPVEAHDPDDLPSLERPRPPKPTGGGRKKGRRGGLRRGG
SSGRGDSRSK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
gtgacagacaactccagtccacagcaagtacttaccgaaacccgattcgatcagttcgac
ctttttccagccattcgccagggcctgctcgatgcaggcttcgaatgctgtaccccgatt
caggccagcacactgccgctgacgctgtcgggccgcgatgtcgccggccaggcgcgaacc
ggcaccggcaagaccgcggcctttctgctcacggtgttccagcgcctgctcagcgatgac
agcgtcgggccgggcccgaatccgcgctccatcatcatcgcgccgacacgcgaactggcc
attcagattcatcgcgatgccgagttgctgggcaagcacacgggactgcgtaccgttctg
acctacggtggtgtcgactacgcgcgtcagcgcgagcagatcgccagcggggtggatatc
ctcatcggcacgccgggccgtctgatcgattacttcaagcagggggtctacaacctcaag
cacatcgaggtggtggtgctcgacgaggccgatcgcatgttcgatctgggctttatcaag
gatatccgctacctgttccggcgcatgccgccggtcgacaagcgccagaccctgatgttt
tcggccaccttcccgctcaaggtcacggaactggcctacgaacacatgaacgatgccgag
accatccgcttcgaggaggagcaggtcaccagcgatcgcgtcacccaggtggtctattac
ccggccaaccgtgagaaattgcctctgctggtcaagttgctgcgtggcatggaagacggg
catgtcatggttttcgtcaacacccggcaccagaccgaccgcgtcgcgcggacactcaag
gccaacggcatcaacgcggccatgctggctggcaacgtgcctcagaagaaacgccagtcg
ctgctcaagcgcttccatgatggagaaatcgacgtgctggtcgctaccgatgtggccgcg
cgcgggctgcatattcccgatgtcagccacgtgatcaacttcgatttgcctcaggatgcg
gccgactacgtgcaccgtatcggccgaacggcccgcctgggggcgacgggagacgccatc
agttttgcctgtgaggactacgcatttcacctgcccgagatcgaggagtacatcgagatg
ccgctgccggtcgaagcgcatgatcccgatgacctgccgagcctcgaacgcccccggcca
cccaagccgaccggcggtggcaggaagaaggggcgccgcggcgggctccgtcggggcggc
agctcggggcgcggcgatagccggtcgaagtga
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