Wenzhouxiangella sp. AB-CW3: IC757_04295
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Entry
IC757_04295 CDS
T08427
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
wez
Wenzhouxiangella sp. AB-CW3
Pathway
wez03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wez00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IC757_04295 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wez03021
]
IC757_04295 (rpoC)
03400 DNA repair and recombination proteins [BR:
wez03400
]
IC757_04295 (rpoC)
Enzymes [BR:
wez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IC757_04295 (rpoC)
Transcription machinery [BR:
wez03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IC757_04295 (rpoC)
DNA repair and recombination proteins [BR:
wez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IC757_04295 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QOC23369
UniProt:
A0A7H4GPQ7
LinkDB
All DBs
Position
1000432..1004643
Genome browser
AA seq
1403 aa
AA seq
DB search
MRDLFNLYKRQSQVTDFDAIRIGLAPPELVRSWSFGEVRKPETINYRTFKPEREGLFCAA
IFGPVKDYECLCGKYKRMKHRGVKCEKCGTEVTLTKVRRERMGHIDLASPVAHIWFLKSL
PSRIGLMLDMTLRDIERVLYFESYLVLDPGMTMLERGQLLTDEEYLDAMQEYGDEFVAKM
GAEAVYDMLKNIDLHTELTQLREEIAATNSETKIKRLSKRIKLMEAFIESGNRPEFMIMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHECGLPKKMALELFKPFIFSKLQRRGLAMTIKAAKKLVEREESEVWDILEEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEA
RALMMSSNNILSPANGEPIIVPTQDVVLGLYYMTRQIAGKRGEGMYFSRVAEVHRAYNNG
QVDLQAGITVRVRDVEVTEDGERIESFARIKTTVGRALLREILPEGLPFELVNQVLKKKQ
ISRLIDECYRKLGLKKTVVFADQLMYTGFHYSTRAGVSIGLDDLQVPPEKKAILERAEKE
VLDIQNQYASGVVTSGERYNKVVDIWSRTNEEVARAMMERIGKQTRIDSDGNEVKEDSMN
SIFIMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVIEEDCGTEQGLEMLPIVEGGDVVEPLGERIL
GRVVGEDIYLADSDEVFCARGTLLDEQWVEQLESAGVDRVLVRSPITCATRHGICAQCYG
RDLARGALVNQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRSVAVDHIEVKSGGSIRL
YNLKSVENTEGKLVAVSRSGELSVIDSHGRERERYKIPYGAMVSVREGDKVEVGQNVANW
DPHTHPVVAELAGFARFHDFISGVTVTEEVDDVTGLTSVVVTDPKKRGSEGKDLRPMVRL
VDKDGKQLNIPGTEQPAQYYLPAGAVINCADGDEIKVGDIVARIPQESSKTRDITGGLPR
VADLFEARKPKEGAILAEASGVVSYGKETKGKQRLVITDEHGEAHEELIPKWRQVLVFEG
EHVEKGETVVDGEPNPHDILRLLGVEKLADYLVQEIQDVYRLQGVKINDKHIEVVIRQML
RKVEIQEAGDSNFLRGEQVEATRAQEEHERLSESGKLAPSWQNVLLGITKASLATESFIS
AASFQETTRVLTDAAVRGTVDSLRGLKENVIVGRLIPAGTGRVAAQRRRERRHEEADAEL
AALLKASDGEAEEAKAEESAGDE
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgacctgttcaacctatacaagcgtcagtcccaggtaaccgactttgacgcgatt
cgcatcggcctggctccgccggagctggtccggtcgtggtcattcggcgaggttcgcaag
ccggagactatcaactaccgaaccttcaagcccgagcgcgaaggcctcttctgtgccgcc
attttcgggccggtcaaggactatgagtgcctgtgcggcaagtacaagcgcatgaagcac
cgcggcgtgaagtgcgagaagtgtggcaccgaggtcaccctgaccaaggtgcgccgcgag
cgcatgggtcatatcgacctggcctcgccggtggcccatatctggttcttgaagtcattg
cccagccgcatcggcttgatgttggacatgaccctcagggacatcgagcgggtgctgtac
ttcgagtcctatctggtgctcgatccgggaatgaccatgcttgagcgcggccagctcctg
accgacgaggagtatctcgacgcgatgcaggagtacggcgacgagtttgtcgccaagatg
ggcgccgaagccgtctacgacatgctcaagaacatcgatctccataccgagttgacccag
cttcgggaagagattgccgcgaccaactcggaaaccaagatcaagcgtctttccaagcgc
atcaagctgatggaggcgtttatcgagtcgggcaaccgacccgagttcatgatcatgacc
gtgctgccggtgctgccgccggacctccggccgctggtaccactggacggcgggcgattc
gcgacttcagatctcaacgatctgtaccgccgcgtcatcaaccgcaacaaccgcttgaag
cgcctgcttgagctcaacgcgcccgacatcatcgtgcgcaacgagaagcgcatgctgcag
gagtcggtcgatgcactgcttgacaacggccgtcgtggtcgggccatcaccggcaccaac
aagcgcccgctgaagtcgctggccgacatgatcaagggcaagcagggccgttttcgtcag
aacctgctgggcaagcgtgtcgactactccggccgttcggtcatcgtggtcggcccgacg
ctcaagctgcatgaatgcggcctgcccaagaagatggcgctggaactgttcaagccgttc
attttctccaagctgcagcgccgcggtctggccatgaccatcaaggcggccaagaagctg
gtcgagcgcgaagagtcggaagtctgggacatcctcgaggaagtcatccgcgagcacccg
gtactgctgaaccgtgcgccgaccctgcaccgactgggcatccaggccttcgagccggtg
ctcatcgagggcaaggccatccagcttcacccgctggtctgtaccgccttcaacgccgac
ttcgacggtgaccagatggccgtgcacgtgccgctttcgctggaagcccagctcgaggcg
cgcgcgctgatgatgagctcgaacaacatcctgtctccggccaacggtgaaccgatcatc
gtgccgacccaggatgtggtgctgggcctgtactacatgacccggcagatcgccggcaag
cgcggggagggcatgtacttctcgcgggtggccgaggtgcaccgcgcctacaacaatggt
caggtggaccttcaggctggcatcacggttcgggtgcgagacgttgaagtcaccgaagac
ggtgagcggatcgaatcttttgccagaatcaagaccacggtggggcgggcgcttctgcgc
gagatcctgcctgaaggtctgccgttcgaactcgtcaaccaggtgctgaagaaaaagcag
atttcgcgtctgatcgacgagtgctaccgcaagctgggactgaaaaagaccgtggtgttt
gccgaccagctcatgtacaccgggttccattattcaacccgtgccggcgtgtccatcggt
ctcgacgatctgcaagtgccgccagagaagaaggccattctcgagcgtgccgaaaaggaa
gtgcttgatatccagaaccagtacgcctccggtgtggtgacttccggcgagcgctacaac
aaggtggtcgatatctggtcgcgcaccaacgaggaagtggcgcgcgcgatgatggaacgc
atcggaaagcagacgcgcatcgacagtgacggcaatgaggtcaaggaagactcgatgaac
tcgatcttcatcatggccgactccggcgcccgaggctctgctgcccagatccgtcagctg
gccggcatgcgtggcctgatggccaagccggacggctccatcatcgagacgccaatcacg
gccaacttccgcgaaggcctgaacgttctgcagtacttcatttccacgcacggtgcccgt
aagggtctggccgatacggcgctcaagacggcgaactcgggatacctgacccgtcgcctg
gtcgacgttgctcaggacctggtcgttatcgaagaggactgcggcaccgagcagggcctg
gaaatgctgcccatcgtggaaggcggcgatgtcgtcgagcctctgggtgagcgaattctt
ggtcgcgtggttggcgaggacatctatcttgccgatagcgacgaggtgttctgcgctcgc
ggcacgctgctcgacgagcagtgggtcgagcagctcgagagtgccggtgtggaccgggtg
ctggtccgctcgcccatcacctgtgcgacgcgacatggcatttgtgcccagtgctatggc
cgcgatctggcccgcggcgccctggtcaatcagggtgaagcggtgggtgtgattgccgct
cagtccattggtgagcccggcactcagctgaccatgcggaccttccatatcggcggtgcc
gcctcgcgttctgtggctgtggaccatatcgaggtcaagtcgggcggttcgattcgcctg
tacaacctcaaatcggtcgagaataccgaaggcaagctggtcgcggtgtcgcgctccggt
gaactgtcggtgatcgacagccatggccgtgagcgtgagcgctacaagattccgtacggc
gccatggtcagcgtgcgtgaaggcgacaaggtcgaagtgggccagaacgtggccaactgg
gacccgcacactcacccggtggtcgcggagctggccggttttgcccgcttccacgacttc
atttccggtgtgaccgtgaccgaagaggtcgacgacgtcaccggcctgaccagtgtcgtg
gtcaccgatcccaagaagcgtggttcggaaggcaaggacctgcggcccatggtgcgcctg
gtcgacaaggacggcaagcagctcaacatcccgggcaccgagcagccggcgcagtattac
ctgccggccggcgcggtcatcaactgtgccgatggcgacgagatcaaggtcggcgacatt
gtcgcgcgtatcccgcaggaatcgtccaagacccgtgacatcaccggtggtctgccgcga
gtggccgatctgttcgaggcgcgtaagcccaaggaaggcgcgattctggccgaggcctcc
ggtgtggtcagctatggcaaggagaccaagggcaagcagcgcctggtcatcaccgacgag
cacggcgaggcccacgaggagctcattccgaagtggcgccaggtgctggtgttcgagggt
gagcatgtcgagaagggcgaaaccgtcgtcgacggcgagcccaatccgcatgacatcctc
cgtctgcttggcgtcgagaagctggctgactacctggtgcaggaaattcaggacgtctac
cgcctgcagggcgtgaagatcaacgacaagcacatcgaggtggtcattcgtcagatgctg
cgcaaggtcgaaatccaggaagccggcgacagcaacttcctgcgcggtgagcaggtcgag
gccacccgcgcccaggaagagcatgaacgtttgtctgagtcgggcaagttggccccaagc
tggcagaacgtgctgctcggcatcaccaaggcctcgctggcgaccgagtcgttcatctcg
gcagcatccttccaggaaaccacccgggtgctgaccgacgccgccgtgcgtggcaccgtg
gacagcctgcgcgggctgaaggaaaacgtgatcgtcggccgcctgattccggccggcacc
ggtcgcgtcgccgcccagcgtcgccgcgagcgccgtcacgaagaggccgatgccgagctg
gccgcgctgctcaaggcttcggatggcgaagcggaagaagcgaaggccgaggagtcggcc
ggggacgaataa
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integrated database retrieval system
