Wenzhouxiangella sp. AB-CW3: IC757_05825
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Entry
IC757_05825 CDS
T08427
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
wez
Wenzhouxiangella sp. AB-CW3
Pathway
wez02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
wez00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IC757_05825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
wez02022
]
IC757_05825
02035 Bacterial motility proteins [BR:
wez02035
]
IC757_05825
Two-component system [BR:
wez02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
IC757_05825
Bacterial motility proteins [BR:
wez02035
]
Pilus system
Twitching motility proteins
IC757_05825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_16
HTH_30
RACo_linker
AAA
HTH_28
AAA_7
HTH_24
Receiver_CRE1
Motif
Other DBs
NCBI-ProteinID:
QOC23657
LinkDB
All DBs
Position
complement(1340495..1341910)
Genome browser
AA seq
471 aa
AA seq
DB search
MTEMRALVVDDEPDLRELLDITLSRMGLEVDTAENLAEARHYLSANADYALCLTDMRLPD
GNGLTLIKEINRDHDQLPVAMITAYGKVEDAVTALKYGAFDFVSKPVDLEVLRNMVRTAL
KLRREDLEAPSRPKAAREDADKDAVDKTASSSAQNELMSKLVGRSQAMERVRQTIRKLAR
SQAPVLISGESGTGKELAARLIHDLGPRAEEPFLAVNCGAIPSELMESEFFGHIKGSFTG
ADADKQGLFQAADGGTLFLDEVADLPLAMQVKLLRVIQEKSVRPVGGREEKKIDVRILSA
SHKPLKPLVENGEFRNDLYYRLNVIELPMPSLRDRRGDIRLLAEHFLQSIGEQWGEPPRQ
LSRDAMDALQQHRFSGNVRELVNILQRAVTLCEGDEISVEDLDLDKSVLPEDGIDVKPPE
DRSLDDYIEDIERRILENALREAKYNKTEAARQLGISFRSLRYKLKKYDID
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaatgcgagcactggttgttgacgacgaacccgatcttcgggagttgctcgac
attaccctgagccgcatgggcctggaagtcgataccgccgagaacctggccgaggcccga
cactatctgtcggccaatgccgactatgccctgtgcctgaccgacatgcgactgcccgat
ggcaacgggctgaccctgatcaaggagatcaatcgcgatcacgatcagctgccggtggcc
atgatcaccgcctacggcaaggtcgaggatgccgtcacggccctgaaatacggggctttc
gatttcgtgtccaagcccgtggacctcgaagttctgcgcaacatggtgcgtacggccctg
aagctgcgacgcgaggacctggaggccccgtcacgacccaaggcggcacgggaagacgcg
gacaaggacgcagtcgacaagaccgcatcaagctcggcgcaaaacgaactcatgagcaag
ctcgtgggccgttcgcaggccatggagcgggtcaggcagaccatccgcaagctggcccgc
agccaggccccggtactgatcagtggcgagtccggcacaggcaaggagctggccgcccgg
ctcatccacgacctgggccccagggccgaagaacctttccttgccgtcaactgcggcgcc
attccctcggagttgatggaaagcgagttcttcggccatatcaagggcagcttcaccggc
gccgatgccgacaagcagggccttttccaggctgccgacggcggcacgctgtttctcgac
gaagtagctgatctgccgctggccatgcaggtcaagctgctgcgggtcatccaggaaaag
agcgttcggccggtaggcggtcgtgaagagaagaagatcgacgtacgaatcctctcggcc
tcgcacaagccgctcaagccactggtcgagaacggcgagttccgcaacgatctgtactat
cggctcaatgtcatcgaactgcccatgcccagtctgcgtgaccgtcgcggggatatccgc
ctgctggccgaacactttctccaatctatcggagaacaatggggagaaccccctcgccag
ctcagccgggatgccatggatgcactgcagcagcaccgcttctccggcaatgtccgggaa
ctggtcaacattctccagcgcgccgtcaccctgtgcgagggcgacgaaatcagtgtcgag
gatctggacctggataaatccgtgctgcccgaggacggcatcgacgtcaagccacccgag
gaccgcagcctggacgactacatcgaggatatcgaacgccgtatcctcgaaaacgccctg
cgcgaagccaagtacaacaagaccgaggcagcgcgccagctcggcatctcttttcgctct
cttcgctacaaactgaagaagtacgacatagactga
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