Wenzhouxiangella sp. AB-CW3: IC757_06935
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Entry
IC757_06935 CDS
T08427
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
wez
Wenzhouxiangella sp. AB-CW3
Pathway
wez03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
IC757_06935 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wez03400
]
IC757_06935 (sbcB)
Enzymes [BR:
wez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
IC757_06935 (sbcB)
DNA repair and recombination proteins [BR:
wez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
IC757_06935 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IC757_06935 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IC757_06935 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
STAT2_C
Motif
Other DBs
NCBI-ProteinID:
QOC23849
LinkDB
All DBs
Position
complement(1598479..1599912)
Genome browser
AA seq
477 aa
AA seq
DB search
MNSETFLWYDFETFGADPRRDRPAQFAAIRTDAELQPVGEPEVFYCQPASDMLPHPAACL
ITGITPQMARDRGLPENEFARRIFELMSVPGTCTVGYNNFRFDDEVTRHLFWRNFFDPYV
REYANGNSRFDLIDLLRMTRALRPAGIQWPDYEDGRPSFRLEDVAAANGIDTTRAHDALA
DVEATIEMARLVRHHNPKLWDWALKLRQKSHVVDLLHRAQPLLHSSSRYPAQPGCNTAAV
LPLRQHPRIASQWLVWNLEVDPIPFLDRDEETLADLYWTPEADLPDDLQRVPVKLLRTNR
CPMISPLGVLDRASSERLQIVPGRIESHAEKLRQHPAFLDRLTGIFNQPLAATDIDPELD
LYGGFPPPGDQRLYPRIRDTAPEDLARLQTPFSDERLNELLFRYRARLWPDTLDADETER
WETYRRKRLIDNPDLATIRRDEYRLLLEQLRTEQPQRQALFDELAAWPGQLGLVQEP
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtgaaacctttctgtggtacgacttcgaaaccttcggcgccgacccccgccgg
gaccggcccgcccaattcgcggccatccgcaccgatgccgagctgcaaccggtgggtgaa
cccgaagttttctattgtcagcccgcaagtgacatgctgccgcacccggccgcctgcctg
attaccggcatcacgccgcaaatggcgcgcgatcgggggctgcccgaaaacgagtttgcc
cggcgaatcttcgagctgatgagcgtgcccggaacctgcacggtcggctacaacaacttt
cgattcgacgacgaggtcacccgccacctgttctggcgcaatttcttcgacccctacgtg
cgcgaatacgccaatggcaacagccgcttcgacctgatcgatctgttgcgcatgacccgc
gccctgcggccggccggaatccagtggccggactacgaggacggacgtcccagcttccgg
ctcgaagacgtggccgcggccaacggcatcgacaccacgcgcgcccatgacgccctggcc
gacgtcgaagccaccatcgaaatggccaggctggtgcgccatcacaacccgaagctgtgg
gactgggccctgaagctgcgccagaagagccacgtggtcgacctgctgcatcgtgctcag
cccctgctgcacagctcctcgcgctacccggctcagccaggctgcaacaccgcggccgtg
ctgccgctgcgtcagcatccgcgcattgccagccagtggctggtgtggaatctggaagtg
gaccccatccccttcctggaccgggacgaagagacgctggccgatctgtactggaccccc
gaagccgatctgcccgacgacctgcagcgtgttccggtcaagttgctgaggaccaatcgc
tgccccatgatctcgccgctgggagtgctcgaccgggcctcgtcggaacggctgcagatc
gtgcccggccgcatcgagtcccatgccgagaagctcaggcagcacccggcgtttctcgac
cggctgaccggcatcttcaaccagcccctggccgcgaccgacatcgatcccgaactcgac
ctgtacggcggatttcccccgccgggcgatcagcgtctgtatccgcgcattcgcgacacc
gcacccgaagacctggcccggctgcagacaccttttagcgacgaacgcctcaatgagctg
ctgtttcgataccgggcccgcctgtggccggacacgctggatgccgacgagaccgagcgc
tgggagacataccgcagaaaacggctgatcgacaaccccgacctggccaccatccgccgg
gacgagtaccgcctgctactcgaacaattgcgcaccgaacagccacaaaggcaagcatta
ttcgatgaactggcagcgtggcctgggcaactggggctagtccaggagccctga
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