Wenzhouxiangella sp. AB-CW3: IC757_16000
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Entry
IC757_16000 CDS
T08427
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
wez
Wenzhouxiangella sp. AB-CW3
Brite
KEGG Orthology (KO) [BR:
wez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wez03019
]
IC757_16000 (hrpB)
Enzymes [BR:
wez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IC757_16000 (hrpB)
Messenger RNA biogenesis [BR:
wez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IC757_16000 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
CON_HrpB
Helicase_C
DEAD
HA2_N
Flavi_DEAD
AAA_19
nSTAND3
RoxA-like_Cyt-c
Motif
Other DBs
NCBI-ProteinID:
QOC22486
UniProt:
A0A7H4GM74
LinkDB
All DBs
Position
complement(3710391..3712841)
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AA seq
816 aa
AA seq
DB search
MLPIDDALPDLLAALETHPTVLLTAPPGAGKTTRVPPALLGTDWLDGRRIVMLEPRRLAA
RSAARFMAGEMGETVGRTVGYRTRLDTKVSKATRIEVVTEGILTRMIQSDPELADYACVI
FDEFHERSLRADLGLALVRESQQALRADLRVLVMSATLAVEPLKALLDDPPLIVSEGRSF
PVDVHYRPCPREKQLPAHVAASIRHALDNDGGSLLVFLPGMGEIRRVADLLDGQLPANVT
VCPLHGNLKPAEQDAAIAPAPDGVRKVVLATAIAESSLTIEGIRVVIDAGLQRRSRFDAN
SGMSRLVTESVSRASSAQRAGRAGRLEPGVCYRLWSESQQTALRSHTPAEILDADLAPMV
LELAHWGIDNPGELTWLDAPPQAHWQQAVGLLRWLDALDESGRITTHGRAMLELGLHPRL
AHMVIRGRERNAGGLTAELAALLSDRDLLGPGAGADMGLRLNALRGGNPRVARGRLAQAR
KLAAQIAGKRNGRNESLDAGCLLALAFPDRIACSRGGRGRYRLSNGRGAFLFEDDPLAGE
DWLVAAEVDGQARESRIFLAAAVDPTVLESDLADHITNETSADWDERRGTVIARRERKLG
ALVLESKELERPDAATIEAGLLAAVWRKGLDALPWTDTARQWQARVQLLHGQWPERWPDV
DDNALLESIDDWLRPFLAGLAHWRELEQIDLFNTLNALLDYDQQRELTRLVPTHLEIPTG
RRVRLDYTAEGGPVLATKLQSVFGWTESPKLADGRVPVVLHLLSPAQRPLAVTADLASFW
TNAYPDVRKDMRGRYPKHPWPEDPLRARPREGVGQA
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccatcgacgacgccctccccgacctgctggcggcgctagaaacccacccgact
gttctgctgaccgcgccacccggggccggcaagaccacgcgggtgccgccggccttgctc
ggaaccgactggctggacgggcgccggattgtaatgctggagccgcgccgtcttgccgcg
cgctctgccgcacgcttcatggccggcgaaatgggcgagaccgtggggcggacggtaggc
tatcgcacgcgactggacacgaaggtttcgaaggccacccgcatcgaggtggtcaccgag
ggcattctcacacgcatgatccagtccgatccggaactggccgactatgcctgcgtgata
ttcgacgagtttcatgaacgctcgctccgtgccgacctggggctggcactggtgcgcgaa
tcgcagcaggcgctcagggccgatctgcgcgtgctggtgatgtcggccacgctggcggtc
gaaccgctcaaagccctgctcgatgatccgccgttgatcgtcagcgaaggtagaagcttt
ccggtcgacgtgcactaccgcccctgcccacgcgaaaaacagctccccgcccacgtcgcg
gcaagcattcgacatgctctggacaatgacggcggttcgctgctggtcttcctgccgggc
atgggcgagatccgccgggtggccgatttactggacggtcagctccccgccaacgtgacg
gtctgtcccctgcacggcaacctgaaaccggccgagcaggatgccgccatcgcaccggcg
ccggacggcgtgcgcaaggttgtgctggccacggccatcgccgagtccagcctgaccatc
gagggcataagggtggtcatcgacgccggcctgcaacgacgctcgcgcttcgatgccaac
agcggcatgtcgcggctggtcaccgaatcggtttcgcgcgcatccagcgcgcagcgcgca
ggccgggccgggcgtctggagccgggggtgtgctaccggctgtggagcgagtcgcaacag
accgccctgcggtcgcatacgccggccgagatcctggatgccgacctggccccgatggtg
ctggagttggcgcattggggcattgacaatcccggcgaactcacctggctggatgcaccg
ccgcaggcccactggcaacaggcggtcggactgctgcgctggcttgacgcgctggacgag
tcaggacgcatcaccacccatggccgcgccatgctggagctgggtctgcatccacgcctg
gcgcatatggtcattcgcggtcgcgaacgcaatgccggcggtctgaccgcggaactggct
gcgctgctgtccgatcgcgacctgctgggccccggcgccggggccgacatgggtttgcgg
ctcaatgccctgcgtggcggaaacccgcgcgttgcgcgcggacgactggcccaggctcgc
aaactcgccgcgcagattgcgggcaaacggaatggtcgaaacgaatcactggatgccggc
tgtctgttggcgctggcctttcccgaccgaatcgcgtgttcccggggcgggcgcggccgt
taccggctcagcaatggtcgtggcgcgttcctgttcgaagacgatccgctggccggcgaa
gactggctggtcgccgcggaggtcgacggtcaggcgcgcgagtcacgcatctttcttgcc
gccgcagtcgatccgaccgtactggaatccgacctggccgatcacatcaccaacgagaca
tcggccgactgggacgagcgacgcggcaccgtcattgccaggcgggaaagaaaactgggt
gcgctggtgcttgagagcaaagagctggagcgacccgacgcggccaccatcgaggccggc
ctgctcgccgcagtgtggcgaaaagggctggacgccctgccatggaccgatacggcccgc
cagtggcaggcccgcgtgcagttactgcacgggcagtggccggaacgctggccggatgtc
gatgacaatgcgctgctggaaagcatcgatgactggctccgaccctttctcgccggcctg
gcgcactggcgcgagctcgaacagatcgacctgttcaacacgctcaatgccctgctcgat
tacgatcagcagcgcgagctgacccgactggtacccactcacctggaaattcccaccggc
cgccgggtgcgactggactacaccgccgaaggcggccccgtgctggcgaccaagctgcag
agcgtgttcggctggacggagtcccccaagctggccgatggccgggtgccggtggtgttg
cacctgctctcgccggcgcagcggccgctggctgtcacggccgatctggccagtttctgg
accaatgcctaccccgatgtgcgcaaggacatgcgcggtcgctaccccaagcatccatgg
ccggaagatccgttgcgcgcccgcccccgggagggcgtgggtcaagcctga
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