Wolbachia endosymbiont of Zaprionus tsacasi: R0F63_01300
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Entry
R0F63_01300 CDS
T09659
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
wezt
Wolbachia endosymbiont of Zaprionus tsacasi
Pathway
wezt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wezt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R0F63_01300 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wezt03019
]
R0F63_01300 (pnp)
03016 Transfer RNA biogenesis [BR:
wezt03016
]
R0F63_01300 (pnp)
Enzymes [BR:
wezt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
R0F63_01300 (pnp)
Messenger RNA biogenesis [BR:
wezt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
R0F63_01300 (pnp)
Transfer RNA biogenesis [BR:
wezt03016
]
Prokaryotic type
tRNA degradation factors
R0F63_01300 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KH_NusA_2nd
aRib
DUF1978
Motif
Other DBs
NCBI-ProteinID:
WOE64177
LinkDB
All DBs
Position
252686..254959
Genome browser
AA seq
757 aa
AA seq
DB search
MFKIIKKSIEWGGRALSLETGKIARQAHGSVVVNYGDTSVLVTVVRKKKEESVDFLPLNV
QFIAKSYAMGKIPGGFFKREGKPSDRETLTSRVIDRSIRPLFPEGFHDEISVVCNLLTYD
TVNPPEVPALIGAVAALAISGVPFHFTIAGVMVGCDENNNYILNPSVQEMKASSLDLFLS
GDENSILMVESEVKELSEENVFNAIKFGHEHLKPVIKLIKEFADTIGNKPESFAPIDASD
ITQELEKYGKDFEKAYSQTVKQERVQALEAIRENILNTLKETGKDEKLITYAVKNFERSL
VREIIRKKSVRIDGRKHDEIRQIEVEVDILSKTHGSALFTRGNTQALVVTALGTTQDEQI
VDDIEGDRREHFMLHYNFPSFAVGETSAARAPGRREIGHGKLAWKAIHPVLPDKSEFPYT
IRVVSEILESDGSSSMATVCGTSLALMDTGVPIKAPVAGIAMGLIKDKDEYVILSDILGD
EDYLGDMDFKVAGTSEGVTALQMDMKISGISFEIVEKSLEQAKAGRLHILEKMNAVISEH
SDDVKDHAPRMLSFYIDKDKISAAIGSKGKNIRSVCERSNAKIEIGDDGKVSVFATSGTE
AEIAKSMMIDSITELEQGSIVDVKVVRIEKSIVELEFLNGRKGKMHISEVANEHIDSIES
VLKQDDTFKALVIDFEKGGCPKLSRRRVDQETGEFFEGELYNEERKDGPNDRDNYYNNSF
SRKPGGSHHKRPPRPHSGFSNRNRPKFGNNDSSSGFY
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaattataaaaaaatctatagagtggggtggtcgtgccttatctttagaaaca
ggaaaaatagcacgccaagctcatggttcagtagttgtaaattacggtgatacttctgtt
ttagtaactgttgtacgtaaaaagaaggaagaaagcgttgatttcctacctttaaatgtg
cagtttatcgcaaaaagctatgccatgggtaagatccctggcgggttttttaaaagagaa
ggcaagccatctgatagagaaactttaacctcaagagtaatagatagaagtataagacca
ctattcccagaaggatttcatgatgaaattagtgtggtgtgcaatctattaacttatgat
acagtcaatcctcctgaagtgccagcattgattggtgctgttgcagctcttgcaatttct
ggtgttccctttcactttactatagctggagtgatggttggttgtgatgaaaataataac
tatatactcaacccttctgttcaagagatgaaagcaagcagcttggatctgtttttgtct
ggtgatgaaaattcaattttaatggttgaatcagaagtgaaagagctctctgaagaaaat
gtttttaatgcaataaaatttggccatgaacaccttaagcctgtcattaagctcataaaa
gagtttgctgatacaattggcaataaacctgagagctttgcccctattgatgcatcagat
ataacacaagagctcgaaaaatacggtaaagattttgaaaaagcatattcgcaaacagta
aaacaagagcgagttcaagctctagaagcgatcagagagaatatattgaatactcttaaa
gaaactggaaaagacgaaaagttaattacgtatgcagtaaaaaactttgaaagatcttta
gtacgtgaaataattaggaagaaaagtgtaaggatagacggtcgtaagcatgatgagata
cgtcagatagaagttgaagttgatattctgtccaaaactcacggttctgcactatttaca
agaggcaatactcaggcactggttgttactgctcttggcaccactcaagatgagcaaatt
gtggatgatattgaaggggatagacgtgagcatttcatgttgcattataactttccctca
tttgctgttggagaaacttctgctgcgcgtgcaccaggaagaagagaaatcggtcatggc
aaacttgcttggaaagcaattcatcctgttttacccgataagtctgaatttccttataca
ataagagtagtgtccgaaattttggagtctgatggttcttcttctatggcaacagtttgt
gggacttctcttgctttaatggatacgggtgtgccaataaaggcccctgttgctggaatt
gctatgggtctcatcaaagataaagacgagtatgtaatactttccgatatacttggtgat
gaagattatcttggtgatatggactttaaagtagcaggaactagtgaaggggttacggcg
ctacaaatggacatgaaaatttctggtataagctttgaaattgttgaaaaatctttagaa
caggcaaaagctggaagattacatattttagaaaaaatgaatgcagtgatttcagaacac
agtgatgatgtcaaagaccatgcaccaaggatgttatcattttacatagataaagacaaa
atttctgctgctataggttctaaggggaaaaatatacgcagtgtgtgtgaaagaagtaat
gcaaaaattgaaataggagatgatggtaaagtttctgtttttgctacgagtggcactgaa
gctgaaattgcaaagagtatgatgattgattcaataacagaactagaacaaggttctata
gttgatgtcaaggttgtaagaatagagaagtctattgtagagcttgaatttcttaatggc
agaaaaggaaaaatgcacataagtgaagtagctaatgaacatatagattctatagagagc
gtacttaaacaagatgatactttcaaagcactagtaattgacttcgaaaaaggtgggtgt
ccaaagttgtcaagacgtcgggttgatcaagagacgggagagttttttgaaggtgagctt
tacaacgaggaaaggaaagatggtccaaatgacagggataattattacaataattcattt
agtagaaaacctggaggaagtcaccataagaggcctcctcgtcctcattctggtttcagc
aacagaaataggccgaaatttggtaataatgattcatcatcaggtttttattaa
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