Wolbachia endosymbiont of Zaprionus tsacasi: R0F63_02220
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Entry
R0F63_02220 CDS
T09659
Name
(GenBank) HU family DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
wezt
Wolbachia endosymbiont of Zaprionus tsacasi
Brite
KEGG Orthology (KO) [BR:
wezt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wezt03032
]
R0F63_02220
03036 Chromosome and associated proteins [BR:
wezt03036
]
R0F63_02220
03400 DNA repair and recombination proteins [BR:
wezt03400
]
R0F63_02220
DNA replication proteins [BR:
wezt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
R0F63_02220
Chromosome and associated proteins [BR:
wezt03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
R0F63_02220
DNA repair and recombination proteins [BR:
wezt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
R0F63_02220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_1
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
WOE64330
LinkDB
All DBs
Position
complement(429112..429390)
Genome browser
AA seq
92 aa
AA seq
DB search
MATKSDIIARVAKRHPFLDKIVIAAIVDRFFGILSSTLKHHNRVEIRGFGSFSVRSYNLK
ETSHLMLQKFTKNQYFKTYFRSSKKLSDLINE
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaagtctgatataatagcgagggtagcaaaaagacatccttttttagataag
attgttatagcagctatagttgatagattttttgggatactttcaagcacattgaaacat
cataatagagttgaaattagggggtttggttctttttcagttagaagttataacttgaaa
gaaacaagccatttaatgttacagaagtttacaaagaatcaatactttaaaacatatttt
cgtagcagtaaaaaattatctgatttgataaatgaataa
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