Wenyingzhuangia fucanilytica: AXE80_04775
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Entry
AXE80_04775 CDS
T04444
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
wfu
Wenyingzhuangia fucanilytica
Pathway
wfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXE80_04775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wfu03019
]
AXE80_04775
03009 Ribosome biogenesis [BR:
wfu03009
]
AXE80_04775
Enzymes [BR:
wfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AXE80_04775
Messenger RNA biogenesis [BR:
wfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AXE80_04775
Ribosome biogenesis [BR:
wfu03009
]
Prokaryotic type
rRNA helicases
AXE80_04775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
RecG_N
HTH_CLF_N
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
ANW97433
UniProt:
A0A1B1Y9H6
LinkDB
All DBs
Position
complement(1146646..1148466)
Genome browser
AA seq
606 aa
AA seq
DB search
MSTFSELGLKEEILSALIEMGYETPSEIQEKSIPQVISSTDDLKAFAQTGTGKTAAFSLP
IIQQIDVNSNNVQAIILSPTRELAVQIGDQIEKFSKNIKGLKVVTVYGGASIEDQTRKLN
RGAQIVVGTPGRTVDLINRRRLKLENLQWLVLDEADEMLNMGFKDDLDAVLESTPSTKQT
LLFSATFPREVEAIARNYMHQPVEISAGTKNTGSDDVSNEYYVVTERNRYAAIKRIADVN
PDIYGIIFCRTRRECQEVSEKLIADGYNADSLHGDLSQAQRDNVMQKFRNKTVQMLVATD
VAARGLDVNNLTHVINHKLPDQNEAYTHRSGRTGRAGNKGTSIVLVTAREVGKLRPIERK
IQKKFIKKEVPSGKEICEIQLFKLVEKVKNTEINTKEISGYLDNIYEQFEGLSREELIQK
FISVEFNAFLEYYSKANDINDNRPARESDDRGRRRDDENMSRFFINIGRKDNLTPPRLMG
LINDQNITNNVEIGQIEILDTFSFFELDKNFEKETLDAFLANSPEFEGRGVNVEITKKRR
SGGGGGRGGDRRPRRDGGNFRGGDRPRRDGGDFKGKRRESSGNRDNSNRGNSSGRVQNKS
WGRKRD
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacatttagcgaattagggttgaaagaagaaattctttcagctttgatagagatg
gggtatgaaactccatcagaaattcaagaaaaatcaattccacaagtaatatcatctact
gatgatttaaaagcttttgcacaaactggaacaggaaaaactgcagcttttagtttacct
attattcaacaaatagacgttaacagcaacaatgtacaggcaattattttgtctcctaca
cgtgaattagcggttcaaattggtgatcaaatagaaaaattttctaaaaacattaaaggt
ttaaaagttgttactgtatacggaggagcaagtattgaagaccaaactagaaaattaaat
agaggagcacaaattgttgtgggtactccaggtagaactgttgatttaattaacagaaga
agactaaaactagaaaacttacaatggttggttttagatgaggctgatgaaatgttaaac
atgggattcaaagatgatttggatgctgttttagaatctactccatcaaccaaacaaaca
ttattgttctctgcaactttccctagagaagttgaagctattgcacgtaactacatgcat
caaccagtagaaatttctgcaggtactaaaaacacaggttctgatgatgttagtaatgaa
tactatgtagtaacagagcgtaaccgttatgctgctattaagcgtattgcggatgtaaac
cctgatatttatggtattattttctgtagaactagacgtgaatgtcaagaagtatcagaa
aaattaattgctgacggatacaatgctgactctttacacggagatttatcacaagcacaa
cgtgataacgtaatgcaaaaattccgtaacaaaacagttcagatgttggttgcaactgat
gttgctgctcgtggattagatgtaaacaacttaacacacgtaattaaccacaaattacca
gaccaaaacgaagcttatacacaccgtagtggacgtacaggtagagctggtaacaaagga
acatctattgttttggttactgcaagagaagttggaaaactaagacctattgaacgtaaa
attcaaaagaaattcattaaaaaagaagttcctagcggaaaagaaatttgtgaaattcag
ttatttaaattagttgaaaaagtaaaaaatactgaaatcaacactaaagaaatctctgga
tatttagataatatttacgaacaatttgaaggtttatctcgtgaagaattaattcaaaaa
tttatatcggttgaatttaacgcctttttagaatattactctaaagcaaacgatattaac
gataatagacctgctagagaaagtgatgatagaggaagaagaagagatgacgaaaatatg
tctcgtttctttatcaacataggtagaaaagacaatttaacgcctcctcgtttaatggga
ttgatcaacgatcaaaacataacaaacaacgtagaaataggacaaattgaaattttagat
actttctctttctttgaactagacaaaaactttgaaaaagaaacccttgatgccttttta
gctaattctcctgaatttgaaggaagaggtgtaaatgtagaaatcaccaaaaaacgtcgt
tcaggcggaggtggtggtcgtggtggagatagaagaccacgtagagatggtggaaatttc
cgcggaggagatagaccacgtagagatggtggagattttaaaggtaaacgtagagaatct
tctggaaacagagataactctaaccgaggtaattcttcgggacgtgttcaaaacaaatct
tggggtcgtaaaagagactaa
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