Wenyingzhuangia fucanilytica: AXE80_10665
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Entry
AXE80_10665 CDS
T04444
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
wfu
Wenyingzhuangia fucanilytica
Pathway
wfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXE80_10665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wfu03019
]
AXE80_10665
Enzymes [BR:
wfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AXE80_10665
Messenger RNA biogenesis [BR:
wfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AXE80_10665
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
UvrD-helicase
Fe-ADH
AAA_22
ERCC3_RAD25_C
P-loop_SecA
DUF6256
Motif
Other DBs
NCBI-ProteinID:
ANW96706
UniProt:
A0A1B1Y7G6
LinkDB
All DBs
Position
complement(2662154..2663464)
Genome browser
AA seq
436 aa
AA seq
DB search
MTFESLGLSEAILKAINKKGYTEPSAIQQKAIPHILQGKDVLASAQTGTGKTAGFTLPLL
HSLSTQNKWKRRPIRALVLTPTRELAAQVYDNVREYSEFLDIKSAVIFGGVKPKPQITTL
RRGVDVLVATPGRLLDLISQDALSLSKIEILVLDEADRMLDMGFLRDIKKVLSLVPEKRQ
NLLFSATFSPDIKALANTFMNSPVSVESAPQNTTAEKVKQTFYNVNKGDKPLAIIGMIKS
GNWSQVLVFTRTKHGANKLAERLAKSGVTAAAIHGNKSQAARTKALEGFKKNAVRVLVAT
DIAARGLDIPLLPHVINYELPNVPEDYVHRIGRTGRAGASGEAISLVCGEEIKFALDIEK
LLGLKLPMQNLEGFDFKAPTAEELKAMKKGPSRTTSPKANQKPKTAKKKAKPGEAPKWVQ
AKKNAASKLGRSRNRR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaatctttaggattatcagaggctattttaaaagccattaacaaaaaggga
tatacagagccctcagctattcagcaaaaagccattccacatattttacaaggtaaagat
gtattggcgtctgcacaaacaggaacaggaaaaacagcaggatttacattaccattatta
cattcattatctactcaaaataagtggaaaagaagaccaatacgcgctttggtattaaca
ccaacaagagagttagctgcacaggtttatgacaatgtaagagagtatagtgagttttta
gatattaaatctgccgtaatttttggaggtgtaaaaccaaaaccacaaattactacttta
agaagaggagttgatgtattggtggcaacaccaggtaggttgttagacttaataagtcag
gacgcattatcattatctaaaatagaaatattggttttagatgaagctgatagaatgtta
gatatgggatttttaagagatattaaaaaagtattatctcttgttccagaaaaaagacaa
aacttattgttttcggctactttttcgccagatataaaagctttggctaatacatttatg
aacagtcctgtgtctgtagaatctgctccgcagaacactactgctgaaaaagtgaaacaa
actttttacaatgtaaataaaggagataaacctttggctattatcggaatgataaaatct
ggtaattggagtcaagttttagtatttactcgtaccaaacacggagctaataaattagca
gaaagattggctaaatctggagtaacagctgcggctattcacggaaacaagagtcaagca
gccagaaccaaagccttagaaggatttaaaaagaatgctgttagggtattggtggctaca
gatattgctgcacgtggtttagatattccgttgttgccacacgttataaattacgagtta
ccaaatgtgccagaagattacgtacacagaataggacgtacgggtagagcaggggcaagt
ggagaagctatttctttggtttgtggagaagaaattaaatttgcattggatattgaaaaa
ttattaggtttaaaattacctatgcaaaatttagaaggatttgattttaaagctccaaca
gctgaggagttaaaagcgatgaaaaaaggaccttcgaggacaacatcgcctaaagcaaat
caaaaacctaaaactgcaaaaaagaaagcaaaaccaggagaagctcctaagtgggtacag
gcaaaaaaaaatgcagcttctaaattaggaagaagtagaaatagaagataa
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