Wenyingzhuangia fucanilytica: AXE80_11375
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Entry
AXE80_11375 CDS
T04444
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
wfu
Wenyingzhuangia fucanilytica
Pathway
wfu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wfu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AXE80_11375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wfu03021
]
AXE80_11375
03400 DNA repair and recombination proteins [BR:
wfu03400
]
AXE80_11375
Enzymes [BR:
wfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AXE80_11375
Transcription machinery [BR:
wfu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AXE80_11375
DNA repair and recombination proteins [BR:
wfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AXE80_11375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ANW96844
UniProt:
A0A1B1Y7Y0
LinkDB
All DBs
Position
complement(2806071..2807063)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILNFQKPDKVIMIESTDFEGKFEFRPLEPGFGLTVGNALRRVLLSSLEGFAITSLRIE
GVEHEFSTVQGVVEDVTEIILNLKQVRFKQQIEDTDKETVSVSVSGQNQITAGDIQKFTS
GFQVLNPDLVICNLDSSVAVSFDITIEKGRGFVPAEENKKVNVPLGTIFTDSIYTPIKNV
KYAVENYRVEQKTDYEKLVFDVVTDGSINPKDALTEAAKILIHHFMLFSDERITLEADEI
ARTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVETLGDLVSFNKNDLMKFRNFG
KKSLTELDELVNVKNLHFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttaaattttcagaaaccagataaagttatcatgatcgaatctaccgacttt
gaaggtaaattcgagttcagaccgttagagccaggttttggtttaactgtaggtaatgct
ttaagaagagtattattatcgtctttagaaggtttcgctattacatctttacgcatcgag
ggagtagaacatgagttttctactgtacaaggtgttgttgaggatgttactgaaatcatc
ttaaacttaaagcaagttcgttttaagcaacagattgaagacacagataaagagactgtt
tctgtatctgtatcaggtcagaatcaaatcacggctggtgatattcaaaaatttacttca
ggttttcaagttttaaacccagatttagtaatatgtaacttagacagttctgtagctgta
agtttcgatattactattgaaaaaggtagaggatttgttcctgctgaagaaaataaaaaa
gtaaatgtgcctttaggaactatatttacagactctatttacactcctataaagaatgta
aaatatgctgtagagaactaccgtgtagaacaaaagactgactatgaaaaattagttttt
gacgttgttactgatggatctattaatcctaaagatgcattaacagaagctgcaaaaatt
ttaatccaccactttatgttattctctgatgagcgtatcactttagaggctgatgaaatt
gcaagaacagaaacttatgacgaggagtctttacacatgagacagttattgaaaaccaaa
ttggttgacatggacttatctgtaagagccttaaactgtttaaaagcagcagaagttgaa
acgttaggagacttagtatcttttaacaaaaacgacttaatgaaatttagaaactttggt
aaaaaatctttaacagagttagacgaattagtaaacgttaaaaatttacatttcggaatg
gatttaagtaaatataaattagacaaagactaa
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