Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitan: WIGMOR_0289
Help
Entry
WIGMOR_0289 CDS
T01747
Symbol
rpoD
Name
(GenBank) RNA polymerase, sigma 70 (sigma D) factor
KO
K03086
RNA polymerase primary sigma factor
Organism
wgl
Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitan
Pathway
wgl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
wgl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WIGMOR_0289 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wgl03021
]
WIGMOR_0289 (rpoD)
Transcription machinery [BR:
wgl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WIGMOR_0289 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AFA41128
UniProt:
H6Q5T2
LinkDB
All DBs
Position
290757..292577
Genome browser
AA seq
606 aa
AA seq
DB search
MEKNQQSQLKLLVTRGKEQGYLTFSEVNDHLPENILDSHQIDDIIQMITDMGIQVMDEAP
DPDNLLLPNSTENLDEDVAEVAAQVLSNVESDFGRTTDPVRMYMREMGSVELLTREGEIN
LAKRIEDGINQVQCSVAEYPETITYLLKQYNFILKGELRLSDLITGFIDPNISMDAAAIS
ATIISDLSAEEISVDDHHVTDENNIDVELAHQKFLELQQQYDITYNSIHIHGRNHVNSIK
EITKLADLFKQFRFVPKQFDCLVHIIRAVIAKIRIHERRIMQLCVSVGKMPKKSFIALFT
GCETNENWLKKALSLNKSWSKTLNKLYHSIYFSINKLKLIENETGLTIKQAKDINRRISL
GEEKAKRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKF
STYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEIGREPTPEELSEKM
FMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTSLDLPLDSATSESLRSATHDV
LSGLTPREAKVLRMRFGIDMSTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEIL
RSFLDD
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaatcaacagtcacaactaaagctactagttactcgtggcaaagaacaaggc
tatttgactttttccgaagtaaacgatcatttaccagaaaacattttagattctcatcaa
attgatgatatcattcaaatgataacagatatgggaattcaagttatggatgaagcacct
gatcctgataatttactcctaccaaattcaacagaaaatttagacgaagatgttgcagaa
gtagcagctcaagttttatctaatgttgaatcagattttgggcgtactacagatcctgta
agaatgtatatgcgagaaatgggcagcgttgagttgctaactcgagagggagaaattaat
cttgcaaaacgcattgaagatggaatcaatcaagttcaatgttcagtagcagaatatccc
gaaactattacttatcttttaaaacaatataattttattttaaaaggagaattgcgatta
tcagatttaattactggttttattgatcctaatatttctatggacgctgctgctatatct
gctacaataatttcagacttatcagcagaagaaatatctgtagatgatcatcatgttaca
gacgaaaacaacatcgatgtagaattagcgcatcaaaagttcttagaattacaacaacaa
tatgatattacttataattctattcatatacatggaagaaatcatgtaaattctattaaa
gaaattacaaaacttgcagatttatttaaacaatttcgatttgtaccaaaacaatttgat
tgtttagtgcatattattcgagcagtaattgcaaaaattaggatacatgaaagacgtatt
atgcaattatgtgtaagcgtcggaaaaatgccaaaaaaaagctttattgctttatttacc
gggtgtgaaaccaatgaaaattggttaaaaaaagctttgtctttaaacaaatcttggtca
aaaacgcttaataaactatatcattctatttattttagtattaataaactaaagcttata
gaaaatgaaactggattaacaataaagcaggcgaaagatattaatcgtcgtatttctctc
ggcgaagaaaaagctaaacgtgcaaaaaaagaaatggtcgaagcaaatttgagattagta
atatctatagcaaaaaaatatactaatcgaggactacaatttttagatttaattcaagaa
ggcaatattggattgatgaaagctgtagataaatttgaatatagacgtggttataaattt
tctacttatgccacatggtggattcgacaagctattacaagatcaattgcggatcaagca
cgtactattcgaataccagttcatatgattgaaacaattaataaactaaatagaatttct
agacaaatgttacaagagataggtagagaacctacaccagaagaactatcagaaaaaatg
tttatgccagaagataaaattagaaaagtattaaaaattgctaaagaacctatttctatg
gaaaccccaataggggatgatgaagattcacacttaggagatttcatagaggatacttcg
ttagatttacccttagattctgcaacatctgaaagtttgcgttcagccacacatgatgta
ttgtcaggattaactccaagagaagcaaaagtattaagaatgcggtttggcattgacatg
agtacggatcacactttagaagaagttggaaaacaatttgatgttactagagaaagaatt
cgtcaaattgaagcaaaagctttaagaaaattacgtcatcctagtcgttcagaaatttta
cgcagctttttagacgattaa
DBGET
integrated database retrieval system
