Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitan: WIGMOR_0565
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Entry
WIGMOR_0565 CDS
T01747
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
wgl
Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitan
Pathway
wgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WIGMOR_0565 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wgl03019
]
WIGMOR_0565 (deaD)
03009 Ribosome biogenesis [BR:
wgl03009
]
WIGMOR_0565 (deaD)
Enzymes [BR:
wgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WIGMOR_0565 (deaD)
Messenger RNA biogenesis [BR:
wgl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WIGMOR_0565 (deaD)
Ribosome biogenesis [BR:
wgl03009
]
Prokaryotic type
rRNA helicases
WIGMOR_0565 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AFA41379
UniProt:
H6Q596
LinkDB
All DBs
Position
582324..584069
Genome browser
AA seq
581 aa
AA seq
DB search
MYKKQISFSELGLNNEILKSLHDLGYIRPSPIQEACIPHLLKGHDVLGVAQTGSGKTAAF
FLPLLNNIRSQYNFPQILILTPTRELALQIKFACSNLSKHTKNIYIIALYGGQSYETQLK
KIKKLPQIIVGTPGRILDLLNKKYLNLSKITSCILDEADEMLRMGFIEDVENILSKTSKQ
HQTVLFSATMPQAINKIARRFMQSPKEIRIQCNINTQPDIQQYYWIAYKIRKIDALLRFL
EMENFEAVIIFVRTKHATLEISEILERNGYNSSALNGDMNQLLRENTLNKFKIKKLDVLV
ATDIASRGLDVEHVNLVINYDAPLDSEAYIHRIGRTGRAGRTGKALLFLENREKKILYSI
KRCTKLKITEISLPKTKDLVEKRLNNLSKKIQEQIKYRDLEKYNHLLLKIMRIIDVSDTK
VIATILLKLIQKNKPLILSEDKKILNLNYRKKLKIKKHEKSHLKSLHSNYFYRLNLGKKD
SIFVQNIFELMINIGKISKKFIKHIKLFFDYSVIELSTSLSKDAIRLLTNTSTFHKSLKI
KLIHKNQKSKNYISKNTYSQYPHRISKFIKNQSKISSSKQY
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaaacaaatttctttttctgagcttggattaaataatgaaattttaaaatcg
ttacatgatctcggttatatacgtccttctcctattcaggaagcttgcataccgcatctt
ttaaaaggacacgatgtgttaggagttgcacaaactggtagtggaaaaacagctgctttt
tttttacctttattaaataacattagatcacaatataattttccacaaatactaattctt
actcctacaagagaattggcattacaaataaaatttgcatgttctaatttatcaaaacat
acaaaaaatatttatattattgcattatatggaggtcaaagttatgaaactcaattaaaa
aaaataaaaaaattacctcaaattattgttggaacacccggtcgaattttagacttatta
aataaaaaatatttaaatttatctaaaattactagttgtattttagatgaagctgatgaa
atgttaagaatgggatttattgaagatgtagaaaatatactatcgaaaacttcaaaacaa
catcaaactgtgcttttttcagcaactatgccacaagcaattaacaaaatagcacgtcgt
ttcatgcaatcaccgaaagaaattcgaatccaatgtaatattaatacacaaccagatatt
caacaatattattggatagcttataaaataagaaaaatagatgcacttttacgattttta
gaaatggaaaattttgaagcagtaattattttcgtacgtactaaacatgctactttagaa
atttctgaaattttagaaagaaatggatacaatagttctgctttaaacggagatatgaac
caattacttcgagaaaatacattaaacaaatttaaaattaagaaattagatgttttagtt
gctacagatatagcttctagaggattagacgttgaacacgttaatttagtaattaattat
gacgccccattagattccgaagcgtatatacatcgtattggaagaaccggtcgtgctggt
aggacaggaaaagcattattatttttagaaaatagagaaaaaaaaatactttatagcatt
aaacgttgtacaaaattaaaaattacagaaatttcattacctaaaacaaaagatttagtt
gaaaaacgtttaaataatttatctaaaaaaattcaagaacaaataaaatatcgagatcta
gagaaatataatcatttattattgaaaataatgcgtattatagatgtttccgatactaaa
gtaatagcaactattttactcaaattaatacaaaaaaataaacctctaatactatctgaa
gataaaaaaattttaaatttaaattatagaaaaaaattaaaaatcaaaaaacatgaaaaa
tctcatcttaaatcattacattcaaattatttttatcgtcttaatcttggaaaaaaagat
tcaatatttgttcaaaatatcttcgaattgatgattaatataggaaaaatcagcaaaaaa
tttattaaacatataaaattattttttgattattccgtaatagaattatcaactagttta
tctaaagatgcaattcggttattaaccaatacatcaacttttcataaatctttaaaaata
aaattaattcataaaaatcaaaaatctaaaaattatatatcaaaaaatacatattcccaa
tatccacatcgtatttcaaaattcatcaaaaatcaaagtaaaatatcttcgagcaaacaa
tattaa
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