Weissella hellenica: EFA59_03425
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Entry
EFA59_03425 CDS
T06311
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
whe
Weissella hellenica
Pathway
whe03420
Nucleotide excision repair
whe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
whe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EFA59_03425
03430 Mismatch repair
EFA59_03425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
whe03400
]
EFA59_03425
Enzymes [BR:
whe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EFA59_03425
DNA repair and recombination proteins [BR:
whe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EFA59_03425
MMR (mismatch excision repair)
Other MMR factors
EFA59_03425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
DEAD
SLFN-g3_helicase
AAA_30
UvrD_C
AAA_16
NACHT
AAA_11
DUF7667
PGDH_inter
Motif
Other DBs
NCBI-ProteinID:
QDJ58624
LinkDB
All DBs
Position
700658..702940
Genome browser
AA seq
760 aa
AA seq
DB search
MTPYEAEQKRLDLVLEKIQDAKAENQLQQASAATKKADVDAGWKDVRFKSSTYGSLFETA
MSVRQQQQMLQERELAMNSAEHQAVVLDRLQERPYFARIDVQEKGTEKVDQIYIGLASFS
DGPDNFLIYDWRAPISSIYYDGGLGHVTYETPDGKQDAEVSLKRQFQIEAGTIVTIFDTD
EAVGDQMLLNAVSGESTTKMKSIVTTIQKEQNKIIRNTAADLLFVQGAAGSGKTSAVLQR
VAYLLYRYRGHLTSGQVVLFSPNQLFNDYIDQVLPELGEQNMVQMTFYQYASRRLPKLQL
ETLQERFESQPAGVEKNIIDLKGTSVYFEAMQRYAKKLNKQHIKLRAIKFRGKELISKKR
IAEIYYSFNENYNLGNRLQATKEQLMNILQGKAGNEVHADWVEAEVQNLSKEQYDTMLRD
NPREFESDEAEYKFIAKQIVMKSFTPIIRGVNRNHFININEQFVHFLKSMPNFIDMSAYQ
ITNEDWQTSIKQTVDKMREGALPMADMTPYMMLFDLIKGSRGEREIRFVFIDEIQDYTPF
QLAFLKFSFPKARFTMLGDLNQAIFTKENAVSLQDELGQLFDPKKSEYIELTQTYRSTQQ
ITDFSKDILLHGAQIDAFEREGDLPVVSVVDSVDDMVAGTVQQLAANVAAKETTAIITKT
LDDAKIAYEALRNQVDVTVIRTENQRLVSGTIIVPAYLAKGLEFDAVIMWDASANVYHGD
DERQLVYTIASRAMHQLTVFAVEKLTPLLAGVADDLYEKR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgtatgaggcagaacaaaaacgcttagatcttgtattggaaaaaatccaggat
gctaaagcggaaaatcaattgcaacaggcaagcgccgctactaaaaaagcggatgttgac
gctggctggaaagatgttcgtttcaaatcatcaacgtatggtagtttatttgaaacagcg
atgtcggtacgtcaacaacagcaaatgctacaagaacgtgaactagcaatgaattcagct
gagcaccaagcagttgttttagatcggctacaagaacgtccttattttgcgcggattgat
gtacaagaaaaaggaacagagaaagtggatcaaatttatattggtctggcatcattttct
gatggacctgataactttttgatttacgactggcgtgcaccaatttcttctatttattac
gatggcggattaggtcatgtgacttatgaaacaccagatggcaaacaagatgcagaggtt
tcattaaagcggcaattccaaattgaagctggtacgattgtaaccatttttgatacggat
gaagcagtcggtgatcaaatgttattaaatgccgtttctggcgaatcaacgacaaaaatg
aagtcaatcgttacaacgattcaaaaagaacaaaacaaaattatccgtaacacggcagca
gatttgttatttgtgcagggggcagctggttctggaaaaacatcagctgtcttgcaacga
gtggcgtacttattgtaccgttatcgtggtcacctaacatcaggacaagttgttttattt
tcaccaaatcaattatttaatgattatattgatcaagtgttgcctgaactaggggaacaa
aatatggtgcaaatgacattttatcaatatgcatcacgccgtttaccaaagttgcaatta
gaaacactacaagaacgcttcgaatcacaaccagctggcgttgagaagaatattattgat
ctaaagggaaccagcgtttactttgaggccatgcagcgctatgcaaaaaagctcaataag
caacatattaagctacgagcaattaaatttagaggtaaagagctaattagtaaaaaacgt
attgctgaaatttactattcatttaatgaaaactataatttaggtaatcgactacaagca
actaaagagcagttgatgaatattttacaaggtaaagctggtaatgaagtacatgctgat
tgggtcgaagccgaagtacaaaatctaagtaaagagcaatacgatacgatgttacgtgat
aatccacgtgaatttgaatcagatgaagcggaatataagttcattgctaagcaaatcgtg
atgaagtcatttacgccaattattcgtggtgttaaccgaaatcatttcattaatattaat
gaacagtttgtacactttttgaagtcaatgcctaatttcatcgatatgtcagcctatcaa
atcacaaacgaagattggcaaacaagtattaagcaaaccgttgataaaatgcgggaaggt
gctttgccaatggcagatatgacaccttatatgatgctgtttgatttaataaagggaagc
cgaggtgaacgtgaaattcgctttgtctttattgatgaaattcaagattatacgccattc
caattagcctttttaaaattcagttttccaaaggcacgttttacaatgttaggcgatttg
aatcaagccatttttaccaaagaaaatgcagttagtttgcaagatgaattaggccaatta
tttgatcctaaaaaatcagagtatatcgagctaacccaaacataccgttcaacgcagcaa
atcacggacttctctaaagatattttgttgcatggtgcgcaaattgatgcttttgaacgt
gaaggtgatttaccagttgtatcagttgttgactcggttgatgatatggttgcaggtacg
gtacaacaattagctgctaatgtcgctgcaaaagaaacaacggcaatcattacaaaaaca
ttggacgatgcaaaaattgcttatgaagctttacgtaatcaagtagatgttactgtgatt
agaaccgaaaaccagcgcttagtatcaggaacaattatcgtaccagcatacttagcaaag
ggattggaatttgatgcagtcattatgtgggatgcatcggccaatgtttaccatggtgat
gatgaacgtcagttggtctatacgattgcatcacgtgcaatgcatcagttaacagtcttt
gcagtagaaaaactcacaccattattggctggtgtggcagatgacttatacgagaagagg
taa
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