Weissella hellenica: EFA59_08025
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Entry
EFA59_08025 CDS
T06311
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
whe
Weissella hellenica
Pathway
whe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
whe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EFA59_08025 (abc-f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
whe02000
]
EFA59_08025 (abc-f)
01504 Antimicrobial resistance genes [BR:
whe01504
]
EFA59_08025 (abc-f)
Transporters [BR:
whe02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
EFA59_08025 (abc-f)
Antimicrobial resistance genes [BR:
whe01504
]
Gene variants
Macrolide resistance genes
Transporters
EFA59_08025 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_15
AAA_29
ABC_tran_Xtn
AAA_22
nSTAND3
AAA_30
AAA_23
KAP_NTPase
SRPRB
RNA_pol_Rpb1_2
Hydrolase_3
DUF5899
Motif
Other DBs
NCBI-ProteinID:
QDJ59460
LinkDB
All DBs
Position
complement(1605262..1606758)
Genome browser
AA seq
498 aa
AA seq
DB search
MSTIELKQLTFGFDNQAQSLFEKADLTIDVSWKLGLIGRNGRGKTTLLNLLRGMYPYQGT
ITHQVSFNYFPQSIKDASQLTYDVLNEVANVEIWQIEKELRLMQTDAAVLWRPFASLSGG
EKTKVLLGLLFSDHEHFPLIDEPTNHLDQQSRKQIAQYLKNKKQGFILVSHDRAFVNEVV
DHVIAIEKQQLISYQGNFATYEEQKSRRDQYELDQNKKLQTEIGRLKQTASEKAEWSHGR
EKEKFGNRHVEGSGAIFDRGAIGARAARTMKRSKTLVRHMESKIASKEQLLKEIETIDRL
IMNYQPSYHKTLISVKNLQLAYEQSLFEPISFQLAKGERLAIQGNNGSGKTSIIHYLLGM
FAGQIAGEITMPENIRISYVRQNYEDNTGTLAEFAAEHHLSYEILLNNLHKLGLERHIFN
TRIENMSMGQRKRVELAKSLATPATLFIWDEPLNYLDVFNREQLEEVIQSVQPTMLLVEH
DETFLNNIATQVIKLHHE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
ttgagtactattgaattaaaacaattaacatttggttttgataatcaggcgcaatctttg
tttgaaaaagctgatttaacaattgacgtgtcttggaaattgggattaattgggcgaaat
ggtcgtggtaaaacaacattgttaaatttattacgtggcatgtacccctatcaaggcacg
attacacatcaagtcagttttaactattttccacaatcaattaaagatgctagtcaatta
acttatgatgtattaaatgaagtcgcgaacgttgaaatttggcagattgaaaaagaactg
cggttaatgcaaacggatgctgctgttttatggcgaccattcgctagcctatccggtggt
gaaaaaacaaaagttttattgggattattgtttagtgatcatgagcattttccactaatt
gatgaaccaactaatcatttagatcagcaatcaaggaaacagattgcccaatatttaaaa
aataagaagcaaggttttattttagttagtcatgatcgtgcattcgttaatgaagtcgtg
gaccatgtgattgcaattgaaaagcagcaattaataagctatcaggggaattttgcgacc
tatgaagaacaaaagtctagacgtgatcaatacgaattagatcagaataaaaaattacaa
acagaaattggccgtttaaagcaaacagcaagtgaaaaagcagagtggtcacatggtcgt
gaaaaagaaaaatttggtaatcgtcacgttgaaggcagtggtgctatttttgaccgtggc
gcgattggtgcgcgtgctgcacggaccatgaagcgttccaaaacattagtgcgccatatg
gaaagtaaaattgcttctaaggaacaattgcttaaagaaattgaaaccattgatcggtta
atcatgaattatcaaccgagctaccataaaacactaatcagtgttaaaaatctgcaatta
gcttatgaacaatcattatttgaaccaatttcttttcaactagcaaaaggtgaaaggctg
gctattcaaggaaataatggctcgggtaaaacatcaattattcattatttattgggaatg
tttgctggtcaaattgctggtgaaataacaatgccagagaatatacgtattagttatgtg
cgtcaaaattatgaagataatacagggactttggcagaatttgcagctgaacatcactta
tcttacgaaatattattaaacaacttacataaattgggtttggaacgtcacatattcaat
acgcgtattgaaaatatgagtatgggacagcgaaaacgtgtcgaattggccaaatcatta
gcgacaccggcaaccttatttatttgggatgaacctttaaattatttggacgtttttaat
cgggaacaattggaggaagtcattcaatcagtgcaaccgactatgttgctagttgaacac
gatgaaacatttttgaataatatcgccacacaagtgattaagctgcaccacgaataa
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