Wansuia hejianensis: H9Q79_06255
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Entry
H9Q79_06255 CDS
T08122
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
whj
Wansuia hejianensis
Brite
KEGG Orthology (KO) [BR:
whj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
whj03009
]
H9Q79_06255 (rlmD)
Enzymes [BR:
whj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
H9Q79_06255 (rlmD)
Ribosome biogenesis [BR:
whj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H9Q79_06255 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Cons_hypoth95
Methyltransf_15
MTS
TRM5-TYW2_MTfase
Methyltransf_25
PrmA
N6_N4_Mtase
Methyltransf_4
Ribosomal_L23
Motif
Other DBs
NCBI-ProteinID:
QNM09879
UniProt:
A0A7G9GGE7
LinkDB
All DBs
Position
complement(1357465..1358889)
Genome browser
AA seq
474 aa
AA seq
DB search
MDKYCKISKKCGGCAYQGIPYEEQLRKKETQVRKLLSDICPVRPIMGMEEPYHYRNKVHA
AFARKHDGKVISGVYEEGTHRIVPVESCLIEDEKADAIIGTVRSLVNPFRIRIYNEDSGY
GLLRHVMVRRGFQSGQILVVLVLASPILPAKNNFVKALRKEHPEITSIVLNVNAKRTSMV
LGERNIVLYGKGYIEDTLCGKTFRISPQSFYQVNPVQTEKLYGKAVELAGLTGKERVIDA
YCGIGTIGLIASGRAKEVIGVELNRDAVKDAIYNARINGIKNAKFYAGDAGEFMTVMAAE
GEKADVLFMDPPRAGSGEAFLSSAVKLGPEKIIYISCNPETLARDLRYLKKKKYEVKEAW
PVDCFAWTNHVESIVLLSKLKSNKLKHIDVELEMDELDLTAAEKKATYQEIKDYVMEHSG
LKVSSLYIAQVKGKCGIIERENYNKAKSEDAKQSQCPAEKEAAIREALKFYGMI
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggataaatactgtaaaatatcaaagaaatgcggcggctgcgcatatcagggaattccc
tatgaagaacagctgagaaaaaaagaaacccaggtgagaaagctgctgtcagacatttgt
ccggtgcgccccatcatggggatggaggaaccgtaccattacaggaacaaggtgcatgcg
gcctttgcccggaagcatgacggaaaggttatctcaggcgtttacgaagaaggcactcac
cggatagttcctgtggagtcctgtctgatagaggatgaaaaagcagacgccatcatcggg
acggtccgcagccttgtaaatccattccggatcaggatttacaacgaggacagcggttat
ggcctgctgcgccatgtgatggtgcggagaggctttcagagcggtcagatcctggtagtt
ctcgtgctggcgtcgcctatcctgccggcaaaaaataactttgtaaaagctctgcgcaag
gagcatccggagatcacctccatcgtactcaatgtcaacgccaagcggaccagcatggtg
ctgggcgagcgcaatattgtgctttacggcaaggggtatatcgaagacacgctctgtgga
aaaaccttccggatatctccccagtcattttatcaggtaaatcccgtgcagacagagaag
ctttacggaaaagcggtggagctggccggactgacgggaaaggaacgtgtgatagacgcc
tattgcgggatagggactattgggctgatagcttccggcagagcgaaggaagtcatcggc
gtggagctaaaccgggatgcggtaaaggatgcgatctataatgccaggataaacggcata
aaaaacgccaaattttatgccggagatgccggcgaattcatgaccgtcatggcggcggag
ggtgaaaaggcggatgtgcttttcatggacccgccgagagccggaagcggcgaggcattc
ctgtcgtcggccgtgaagctggggccggagaaaatcatatatatttcctgcaatccggaa
acactggcaagagacctgagatatctgaagaaaaagaaatatgaagtgaaagaggcctgg
ccggtggactgctttgcgtggacgaatcatgtggaaagtattgtgttgctttcaaaactt
aaatctaataagttgaagcatatcgatgtggagttagagatggatgagcttgatttgacg
gcggcggaaaagaaagcgacctatcaggagattaaggattatgtgatggaacatagcggc
ttgaaggtgagcagcttatacattgctcaggtgaaagggaaatgtggtattattgaacgg
gagaattataataaagcgaagtctgaggatgccaagcagtcacagtgtccagcggagaag
gaagcagctataagagaggcgttaaagttttatggtatgatataa
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