Wansuia hejianensis: H9Q79_07955
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Entry
H9Q79_07955 CDS
T08122
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
whj
Wansuia hejianensis
Brite
KEGG Orthology (KO) [BR:
whj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
whj03009
]
H9Q79_07955 (rlmD)
Enzymes [BR:
whj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
H9Q79_07955 (rlmD)
Ribosome biogenesis [BR:
whj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H9Q79_07955 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
MTS
PrmA
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_15
Methyltransf_11
UPF0020
PCMT
Methyltransf_12
FtsJ
TRM
N6_Mtase
RrnaAD
TPMT
Methyltransf_32
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
QNM10186
UniProt:
A0A7G9GHA4
LinkDB
All DBs
Position
complement(1725587..1727263)
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AA seq
558 aa
AA seq
DB search
MKFQKNDVVIIRIEDMSQTGEGIGKADGYTLFVKDTVIGDLAEVKIVKAKKNYGFGRLMR
IVEPSGKRVVPVCPIARQCGGCQLQMLDYGEQLRFKEDKVRNDLMRIGGFEDVPMEPIIG
MEQPFRYRNKAQFPVGCDREGKAVAGFYAGRTHTIIPCRDCVLGAEANGEILSGILGWME
ENHIPAYDEMSGEGLVRHVLIRYGFTTGEFMVCLVINGAGLPAKKALIDKLCGIEGMRGI
TFSSNTRRTNVIMGDKDQKVWGDGYITDHIGKVKYQISPLSFYQVNPVQTKKLYETALEY
AGLTGEETVWDLYCGIGTISLFLAQRAKQVYGVEIVPQAVEDARRNAELNGIENAEFYVG
KAEEILPELYEKEKVRADVIVVDPPRKGCEESLLETMVQMKPERIVYVSCDPATLARDLK
YLCGEGYEMVRVRGVDQFPMTVHVETVVLLSHKKPDGHINVKVEFGEGEGKVPLDNIAKR
AEEYKPKERVTYKMIKEYIEAKYGFKVHTAYIAEVKRDLGLPMYDAPNAVEELKQPRKHP
TAEKVEAIKDALKHFEVI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcaaaaaaatgatgtggtgataatccgaattgaggatatgagccagacggga
gagggtatcgggaaggcagacgggtatacgttgtttgtcaaggatacggtgatcggtgat
ctggcagaggtgaagattgtcaaggcgaaaaaaaattacgggtttggcaggctgatgagg
attgtggagccttccgggaaacgggtggtaccggtgtgcccgattgcccggcagtgcgga
ggatgtcagttgcagatgctggattatggggagcagcttcggtttaaggaggataaggtc
aggaacgatctgatgcggatcggaggatttgaggatgtgccgatggagccgatcattggt
atggagcagccgtttcggtacaggaataaggctcagtttccggtgggatgcgacagagaa
ggaaaagcagtggccggattttatgcaggccgtacccatacgatcattccctgcagggac
tgcgtgctgggagcagaggccaatggagagattttgtccgggattctgggctggatggaa
gaaaatcacataccggcctatgatgagatgagtggcgaagggctggtaaggcatgtgctg
atccggtatggatttacgaccggtgaattcatggtgtgcctggtgataaacggggcggga
cttccggccaaaaaagcgctgattgataagctctgcggaatcgaggggatgagaggcatc
accttcagcagcaataccaggcggacaaatgtgattatgggcgataaggaccagaaggtg
tggggagatggatatataacggatcatatcgggaaagtaaagtatcagatttcgccgctt
tccttttatcaagtcaatccggtgcagacgaaaaaactatatgagacggcgttggaatac
gcgggcttgacaggagaagagactgtatgggatttgtattgtgggatagggacgatttca
ctgttcctggcgcaaagggcgaaacaggtgtatggggtggaaatcgtgccccaggcggtc
gaagacgccagacgaaacgcagaactaaatgggattgagaatgcggaattctacgtgggg
aaagcagaggaaattctgccggaattgtatgagaaagagaaagtaagagctgatgtgatc
gtagtggacccgcccaggaaagggtgcgaggagagtctgctggagacgatggtgcagatg
aagcctgagaggatcgtgtatgtaagctgtgatccggccacattggcaagggatttgaaa
tatttgtgcggggaagggtatgagatggtgagggtgcggggggtggatcaatttccgatg
acggtacatgttgagacggtagtactgctttcccacaaaaagccagacggacatatcaac
gtaaaagttgagtttggcgagggtgagggaaaagttccgcttgataatatcgctaaaaga
gccgaagaatacaagcccaaggaacgagtgacctacaaaatgataaaggagtacatagaa
gctaaatatggcttcaaggtacataccgcatatatcgcagaggtaaagagagatttgggc
ttgccgatgtatgatgctcctaatgcggtagaagaattgaaacagccgaggaagcatccg
acagcagagaaggtggaagcgataaaggatgcgttgaagcattttgaagtgatttaa
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