Wansuia hejianensis: H9Q79_08930
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Entry
H9Q79_08930 CDS
T08122
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
whj
Wansuia hejianensis
Pathway
whj02020
Two-component system
whj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
whj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H9Q79_08930 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H9Q79_08930 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
whj03021
]
H9Q79_08930 (rpoN)
Transcription machinery [BR:
whj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H9Q79_08930 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_IclR
HTH_11
MarR
HTH_5
Fe_dep_repress
HTH_37
HTH_26
Motif
Other DBs
NCBI-ProteinID:
QNM10368
UniProt:
A0A7G9GHT6
LinkDB
All DBs
Position
complement(1972437..1973813)
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AA seq
458 aa
AA seq
DB search
MLKTELTQKQIVTQQMVQSAAILQMSAQELELYLQDLALENPVVELEEAPPQEDLQQMEL
QRKIDWLEEADYQNRAYYQEDRTAAGSKEDAWHSSDAQEQSLSEYLRLQLLPGTYSRQDW
RILEYLIESLDARGYFTDGIRTAAEVLHVSEEKVKAMLEVIQGLEPAGIGAADLRECLLL
QLRGRQEDTWLAEKIVESYLGEMGKNHLKEIARTLHATREQVQEACRMIRSLHPKPGSVF
YTGESPGYIRPDALVLKEHDSEATFRIIIREGISGTFRISEYYQALEKETDDPETRHYLK
AKLSQAFSVARDIETRKITLYRVVGAIVNRQSGFFSGSENHKKPLRLSDLAEDLEVHEST
VSRALKGKYLQCSRGVFPLRYFLTGVAVADRESDEGQTPEEVKEAIRKIVEAEDKRKPLN
DGEIQARLAGQNIHIARRTVNKYRQELGITDKAGRRIW
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagactgaactcacgcaaaaacagatagtgacccagcagatggtgcaatcggca
gctatcctgcagatgagcgcacaggagctggagctgtacctgcaggatctggcgctggag
aatccggttgtagagctggaagaagcgccgccccaggaggatcttcagcagatggaactg
cagaggaagattgactggctggaagaggccgattatcagaaccgggcgtattaccaggag
gacaggacggcggcaggaagtaaggaagatgcctggcacagttccgatgctcaggaacag
agcctttctgaatatttgcgcctgcagcttctgccgggaacttacagccgtcaggattgg
aggatcctggagtacctgatcgagtctctggatgcacggggctattttacagacggcata
cggacagcggcagaagtgctgcacgtatcagaagagaaagtgaaagccatgctggaagtc
attcagggcctggagcctgccggtatcggcgccgcggatctgcgggaatgcctgctgctc
cagctgcgcggcagacaggaggatacctggctggcagagaagatcgtggagtcttatctg
ggagaaatgggcaagaatcacctgaaggaaattgccaggacgctgcatgccacccgtgaa
caggtgcaggaggcatgccggatgatacgaagcctgcatcccaagccgggaagcgtcttt
tacacgggagaatctccggggtacatccggccggatgcgcttgtattaaaagaacatgat
tcggaggccactttccgcatcatcatccgggagggtatatccggcacttttcggatcagt
gaatattatcaggctttggagaaagaaaccgatgatccggaaacacgccattacctgaaa
gcaaaactgtcccaggctttttctgttgcgcgggatatagagacgcggaaaatcacgtta
taccgggtggtgggcgctatagtcaaccgccagtcaggcttcttctctggcagcgaaaat
cataaaaagccgttaaggctgtcggatttggctgaggatctggaagtccatgagtcaact
gtcagcagggcgctgaagggcaaatatcttcagtgcagccgcggcgtatttcctctgagg
tactttttgacaggagtggctgtcgctgacagggaaagcgatgaagggcagaccccggag
gaggtaaaggaggcaatccgaaagattgtggaggcggaggacaagcgaaagcctctgaat
gacggcgagatccaggccaggctggccgggcagaacatacatatcgccagaaggacggtg
aataaataccggcaggaattaggaatcacagataaggctggaagaagaatctggtaa
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