Wansuia hejianensis: H9Q79_14385
Help
Entry
H9Q79_14385 CDS
T08122
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
whj
Wansuia hejianensis
Pathway
whj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
whj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9Q79_14385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
whj03019
]
H9Q79_14385
03009 Ribosome biogenesis [BR:
whj03009
]
H9Q79_14385
Enzymes [BR:
whj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H9Q79_14385
Messenger RNA biogenesis [BR:
whj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9Q79_14385
Ribosome biogenesis [BR:
whj03009
]
Prokaryotic type
rRNA helicases
H9Q79_14385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
UTP25_NTPase-like
Cas3-like_C_2
CobA_CobO_BtuR
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QNM08063
UniProt:
A0A7G9GB81
LinkDB
All DBs
Position
3120405..3121859
Genome browser
AA seq
484 aa
AA seq
DB search
MSQISLFDSLSLSPQLSRAVSEIGYTQATDIQAQAIPYLLEGRDVIGRSSTGTGKTAAFG
IPAVECVDGGMKRPQVLVLSPTRELAMQIALEMQKFAKYKEGICVATVYGGASMTDQIRI
LKRANIVIGTPGRLMDHLRRKTLKLNDIKMVVLDEADEMLSMGFVEDIQTILMQAPSERQ
TVLFSATMPPAILSIARQFLSDPQMVDVMEGQEVQADIEQTYYYVPRAKKQEALSLLLQQ
GGARRALVFCNTKSMVDELAATLRRQGIRAAGLHGDMTQTLRTQVMKGFRSGSTQILVAT
DVAARGIDVSEIEVVINFDLPQSFEYYVHRIGRTGRAGKRGLSQTLITDSGQAATLRRLM
RFTGSEIAERRLPTGKDMMKHAVAKAADETLPLLEQGTGKAARMLVNRLKGDEYSGLDAE
QVALILAEKLIGGDSQFQTLAVPETRGGSRQNFRNDYSGAARRAKRTGRRSGPVTSAGRS
AKHS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaatttctttatttgattcactgtcactgtcaccgcagctgtcacgcgctgtt
tctgagattggttatacgcaggccacagatattcaggcgcaggcaatcccttatctgctg
gaggggcgggatgtaatcggccgcagcagcaccggtacgggaaaaactgccgcgtttgga
attccagctgtggagtgtgtggatggcgggatgaaacgtccgcaggtgctcgtgctgtcg
ccgacccgggaactggccatgcagattgcgctggaaatgcagaaatttgcgaaatacaaa
gaggggatctgtgttgccacggtctatggcggggcgtcgatgacggatcagattcgtatt
ttgaaacgggcgaatattgtcattggaacgccggggcgcctgatggatcatctgcgccgt
aaaacgctgaagctgaacgatattaagatggtcgtactggatgaagcggatgaaatgctg
agcatggggtttgtggaggatatccagacgattttgatgcaggcgcccagcgaacggcag
acggtacttttttccgcaactatgccgccggcgattctttccatcgcccgtcaattcctc
agcgatccccagatggtggatgtgatggagggtcaggaagtccaggcagatattgaacag
acgtattattatgtaccccgcgcaaaaaagcaggaggctctttccctgctgctgcagcag
ggcggcgcccggcgcgcgctggtgttctgcaatacaaaaagtatggtggatgagcttgca
gcaactctgcgcaggcagggtatccgggctgccgggctgcacggcgatatgacacagacc
ctgaggacccaggtgatgaaagggtttcgcagcggcagcacacagattctggttgcaaca
gatgttgccgcgcgggggatagatgtttcagaaatagaggtagtaattaacttcgatctg
ccccagagctttgaatattatgtgcaccgcattggccgtacagggcgggcggggaaaaga
ggcctgtcgcaaacgcttattaccgacagcgggcaggcagctaccctgcgccggctgatg
cgttttaccgggagtgaaattgcagaacgccgtcttcccactggaaaggatatgatgaaa
catgcggttgcgaaagccgcggatgagacacttcccctcctggagcaggggacgggaaaa
gccgcccggatgctagttaaccggctgaagggagatgaatattcaggccttgatgcggaa
caggttgctttaatactggctgagaaattaattggcggggacagccagtttcagacactt
gccgtaccggagaccaggggcggatcaagacaaaacttcagaaatgactattccggcgcg
gcgcggagggctaaaaggacgggaagacgttccgggcctgtcacgtctgcggggagatct
gcaaagcacagctga
DBGET
integrated database retrieval system
