Williamsia herbipolensis: OG579_00940
Help
Entry
OG579_00940 CDS
T09708
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
whr
Williamsia herbipolensis
Brite
KEGG Orthology (KO) [BR:
whr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
whr03016
]
OG579_00940 (truB)
Enzymes [BR:
whr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OG579_00940 (truB)
Transfer RNA biogenesis [BR:
whr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OG579_00940 (truB)
Prokaryotic type
OG579_00940 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WUM20450
UniProt:
A0AAU4K2Z1
LinkDB
All DBs
Position
213606..214535
Genome browser
AA seq
309 aa
AA seq
DB search
MNPDGAERSENKHIATAGLIVVDKPGGMTSHDVVAKCRKAFRTRKVGHAGTLDPMATGVL
VLGLERATKLLGLLALTTKSYSATIRLGAGTDTDDREGVLGDRADVSGLDIATVAAAVEH
FVGDIDQVPARVSAIKVDGRRAHDLARSGEEFALASRRVTVSRFDIGEHRIDDGWFDLDV
EVDCSSGTYIRSLARDLGAALGVGGHLTALRRTAVGPFTLAQATPLAAIVDDPSPTPTLD
IDAAVTLAFPTRPVDDVEAQTVSNGRWLDPIGMRGVYAAVDRHGRAIGLLEEKGKRAASV
MVVRPSTMR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccccgacggagccgaacgctccgagaacaagcacatcgcgaccgccggtctgatc
gtggtcgacaagcccggcggcatgaccagccacgacgtcgtcgcgaagtgccgcaaggca
ttccggacccgcaaggtcgggcatgcgggcaccctcgaccccatggcgacgggcgtgctc
gtcctcggtctggagcgggcgaccaaactgctcggtctgctcgcactcaccacgaagtcg
tactcggcgacgatccgtctcggcgcgggcaccgacaccgacgaccgcgagggggtcctc
ggcgaccgggccgacgtctccgggctcgacatcgcgaccgtcgccgcggcggtcgagcac
ttcgtcggtgacatcgatcaggtgccggcgagggtcagcgccatcaaggtcgacggccgt
cgcgcccacgatctcgcgcgcagcggcgaggagttcgcgctcgcgtcgcgccgggtgacc
gtgtcgcgcttcgacatcggcgagcaccggatcgacgacggttggttcgacctcgacgtc
gaggtcgactgctcctcggggacctacatcaggtcgttggcccgcgacctcggcgccgcc
ctgggcgtcggggggcacctgaccgcgctgcgtcgcaccgcggtcggccccttcaccctc
gcccaggccaccccgctcgcggcgatcgtcgacgatccctctcccacaccgacactcgac
atcgacgcggcggtcacccttgccttcccgacccgccccgtcgacgacgtcgaggcccag
accgtcagcaacggacggtggctcgaccccatcggcatgcgcggtgtgtacgccgcggtc
gaccggcacggtcgggcgatcggactgctggaggagaagggcaagcgggccgcgtcggtg
atggtggtccgcccgtcgacgatgcgctga
DBGET
integrated database retrieval system
