Williamsia herbipolensis: OG579_01470
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Entry
OG579_01470 CDS
T09708
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
whr
Williamsia herbipolensis
Brite
KEGG Orthology (KO) [BR:
whr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
whr03016
]
OG579_01470
Enzymes [BR:
whr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
OG579_01470
Transfer RNA biogenesis [BR:
whr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OG579_01470
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
WUM20545
UniProt:
A0AAU4K399
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All DBs
Position
complement(329170..330495)
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AA seq
441 aa
AA seq
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MTDPTASDPTAPDPGSVPASDAPEAAAEPEITPLTQPAEGVPPVLRTPAEFDEAAARLAA
GEGPVALDTERASGFRYSGRAYLVQIRRRGSGSFLIDPIDHPDALGGVIAALDGPQWVLH
AADQDLPCLRELGFVCADLFDTELGGRLLGLPRVNLAAMVAHHLGLGLVKGHGAADWSRR
PLPEDWLNYAALDVEVLVELRDAVAADLVAAGKDEWAAEEFEHVRTKPEPPPRVDRWRRT
SSLHTVKSTRALAIVRELWSSREELAIERDIAPGRVLPDSAIVSAAQASPATAEDLTRLP
VFGGHRQRRLARRWFGAIDRARRLADADLPPRNAGGAGLPAVNRWANRNPEAAQRLSATR
TALAELSERVGTPVENLLQPDLMRQICWDGVGEPVTLDAITERLTRGGARRWQRELCTPL
MFTAFTAPPEPDAPADAEPAS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcccacagcgtctgatcccacagcgcccgatcccggttccgtgccggcctcg
gacgcccccgaggcggccgcggaaccggagatcaccccgctgacccagcccgccgagggc
gtgccgcccgtactgcgcaccccggccgagttcgacgaggcggcggcacgtctcgccgcg
ggcgagggaccggtcgccctcgacaccgagcgcgcgtcgggcttccgctactccggtcgg
gcgtatctcgtgcagatccgccgacgcggttcgggctccttcctcatcgaccccatcgac
caccccgacgcgttgggcggcgtgatcgccgccctcgacggaccgcaatgggtcctgcac
gccgccgatcaggacctgccctgcctgcgcgaactgggcttcgtgtgcgccgacctgttc
gacaccgaactcggcggacgtctcctgggcctgccccgggtcaacctcgcggccatggtg
gcccaccatctcggcctcggactggtgaaagggcacggcgccgccgactggtcacgccga
ccgctccccgaggactggctgaactacgccgccctcgacgtcgaggtgctggtggagcta
cgcgacgccgtcgccgccgacctcgtcgcggccggcaaggacgagtgggcggccgaggag
ttcgaacacgtccgcacgaaacccgaaccgccgccgagggtcgaccggtggcgccggacg
tcgtcgctgcacacggtgaaatcgacccgggcactggcgatcgtccgcgaactgtggtcc
tcccgtgaggaactcgcgatcgaacgggacatcgcgccgggccgggtactgcccgattcg
gcgatcgtctccgccgcgcaggcctcccccgcgaccgccgaggatctcacccgactcccc
gtgttcggcggccaccgtcagcgccgcctcgcgcgccgctggttcggtgccatcgaccgg
gcccgccgactcgccgacgccgatctccccccgcgcaacgccggcggtgccgggctgccc
gcggtcaaccggtgggccaaccgcaatcccgaggccgcacaacgcctgtcggccacccgt
accgccctggccgagctctccgagcgtgtgggcaccccggtggagaacctgctgcagccc
gacctgatgcgtcagatctgttgggacggcgtcggtgaaccggtgactctcgacgcgatc
accgaacgcctcacccgcggtggtgcacggcgatggcaacgtgagctgtgcacgccgctg
atgttcacggcgttcacggcgccaccggaaccggacgcacccgcggacgccgaaccggcg
agctga
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