KEGG   Williamsia herbipolensis: OG579_01470
Entry
OG579_01470       CDS       T09708                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
whr  Williamsia herbipolensis
Brite
KEGG Orthology (KO) [BR:whr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:whr03016]
    OG579_01470
Enzymes [BR:whr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     OG579_01470
Transfer RNA biogenesis [BR:whr03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    OG579_01470
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: WUM20545
UniProt: A0AAU4K399
LinkDB
Position
complement(329170..330495)
AA seq 441 aa
MTDPTASDPTAPDPGSVPASDAPEAAAEPEITPLTQPAEGVPPVLRTPAEFDEAAARLAA
GEGPVALDTERASGFRYSGRAYLVQIRRRGSGSFLIDPIDHPDALGGVIAALDGPQWVLH
AADQDLPCLRELGFVCADLFDTELGGRLLGLPRVNLAAMVAHHLGLGLVKGHGAADWSRR
PLPEDWLNYAALDVEVLVELRDAVAADLVAAGKDEWAAEEFEHVRTKPEPPPRVDRWRRT
SSLHTVKSTRALAIVRELWSSREELAIERDIAPGRVLPDSAIVSAAQASPATAEDLTRLP
VFGGHRQRRLARRWFGAIDRARRLADADLPPRNAGGAGLPAVNRWANRNPEAAQRLSATR
TALAELSERVGTPVENLLQPDLMRQICWDGVGEPVTLDAITERLTRGGARRWQRELCTPL
MFTAFTAPPEPDAPADAEPAS
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgaccgatcccacagcgtctgatcccacagcgcccgatcccggttccgtgccggcctcg
gacgcccccgaggcggccgcggaaccggagatcaccccgctgacccagcccgccgagggc
gtgccgcccgtactgcgcaccccggccgagttcgacgaggcggcggcacgtctcgccgcg
ggcgagggaccggtcgccctcgacaccgagcgcgcgtcgggcttccgctactccggtcgg
gcgtatctcgtgcagatccgccgacgcggttcgggctccttcctcatcgaccccatcgac
caccccgacgcgttgggcggcgtgatcgccgccctcgacggaccgcaatgggtcctgcac
gccgccgatcaggacctgccctgcctgcgcgaactgggcttcgtgtgcgccgacctgttc
gacaccgaactcggcggacgtctcctgggcctgccccgggtcaacctcgcggccatggtg
gcccaccatctcggcctcggactggtgaaagggcacggcgccgccgactggtcacgccga
ccgctccccgaggactggctgaactacgccgccctcgacgtcgaggtgctggtggagcta
cgcgacgccgtcgccgccgacctcgtcgcggccggcaaggacgagtgggcggccgaggag
ttcgaacacgtccgcacgaaacccgaaccgccgccgagggtcgaccggtggcgccggacg
tcgtcgctgcacacggtgaaatcgacccgggcactggcgatcgtccgcgaactgtggtcc
tcccgtgaggaactcgcgatcgaacgggacatcgcgccgggccgggtactgcccgattcg
gcgatcgtctccgccgcgcaggcctcccccgcgaccgccgaggatctcacccgactcccc
gtgttcggcggccaccgtcagcgccgcctcgcgcgccgctggttcggtgccatcgaccgg
gcccgccgactcgccgacgccgatctccccccgcgcaacgccggcggtgccgggctgccc
gcggtcaaccggtgggccaaccgcaatcccgaggccgcacaacgcctgtcggccacccgt
accgccctggccgagctctccgagcgtgtgggcaccccggtggagaacctgctgcagccc
gacctgatgcgtcagatctgttgggacggcgtcggtgaaccggtgactctcgacgcgatc
accgaacgcctcacccgcggtggtgcacggcgatggcaacgtgagctgtgcacgccgctg
atgttcacggcgttcacggcgccaccggaaccggacgcacccgcggacgccgaaccggcg
agctga

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