Williamsia herbipolensis: OG579_02450
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Entry
OG579_02450 CDS
T09708
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
whr
Williamsia herbipolensis
Brite
KEGG Orthology (KO) [BR:
whr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
whr03019
]
OG579_02450
Enzymes [BR:
whr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
OG579_02450
Messenger RNA biogenesis [BR:
whr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OG579_02450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WUM20713
UniProt:
A0AAU4K417
LinkDB
All DBs
Position
536972..539860
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AA seq
962 aa
AA seq
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MTSSEAAGPWDDDTPWGPDAGAPITEGAVTEVVDRPRLREFTDRLSFSLDPFQRESCAAL
EDGHGVLVCAPTGAGKTIVGEFAVHLALQAGTKCFYTTPIKALSNQKYSDLVAVHGADSI
GLLTGDSSINPYAPIVVMTTEVVRNMIYANSPALDGLSHVVMDEVHFLADRFRGAVWEEV
ILHLDPDVKLVSLSATVSNAEEFGDWIKTVRGDTTVVVDDHRPIPLWQHMMVGNRIFDLF
DQRIRPGERPQVNGELTRYIKQREMVEDHQRAHSGRGARGRPQRGRPTGTISRPDLIARL
DRDGLLPAIGFIFSRAGCEAALEQCVRSGLNLLEPDQAEQVAEVVARYTGEFSPSDREIL
RVDSWESGLRRGLAAHHAGMLPAFRHAVEELFVRGLVRAVFATETLALGINMPARSVVLE
RLVKFNGESHVDLTPGEFTQLTGRAGRRGIDVEGHAVVVWMPGLDPTRVAGLAGARTFPL
RSSFAPEYNMAINLIGRLGLAGAKNLLERSFAQFQTDRSVVGQHRQIDKARVILRKIDTE
LVGRASGLGIDPGRLAPDEPVGDASAYDGFLGYMTLREDIRTRERDLKFHKRMTLQANTV
DELFGLKRGHVIGLHGGRHRGLAVVIEPANDRRDPKPLVLCEDGWAGRVGVSDFLNPPEV
VGNMRLPRQVDHRTGRGRRDLASSLRNTGLSVPKGRNTKRSPAADDGELADLRARLRAHP
AHELSSHDELFRLAERRNRSLREITNLTSSVDTRTSTLSVTFDRIVAVLTELGYLLADVD
AEGAPRMVVTESGSTLSRVYSESDLLICECIRAGVWDALTPPELAAVVSSVVYESRRDTY
SGPDLVTGNPTLRETLSATHKQWRTLSALENRHGVGVTREPDAGFATAMYTWAAGRSLGE
ALAVAGERGRPLPAGDFVRWSRQVIDLLEQIRMSAGAEGRLARSAKSAVGCIKRGVVAVE
LG
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgacatcctctgaggccgccggaccctgggacgacgacaccccctggggccccgacgcc
ggtgccccgatcaccgagggcgccgtcaccgaggtggtcgatcgtcctcggctgcgtgag
ttcaccgaccggctgtcgttctccctcgacccgttccagcgggagtcgtgcgcggctctc
gaggacggccacggggtgttggtgtgcgcgccgaccggtgcgggcaagaccatcgtcggc
gagttcgccgtgcacctggcgctgcaggccggcacgaaatgcttctacaccaccccgatc
aaagcactgagcaaccagaagtactccgatctcgtcgcggtgcacggcgccgactccatc
ggactgctgaccggcgacagctcgatcaacccctacgccccgatcgtggtgatgacgacc
gaggtcgtccgcaacatgatctacgcgaactcgcccgcgctcgacggtctgtcgcatgtc
gtgatggacgaggtccacttcctcgccgaccgcttccgcggcgcggtgtgggaggaggtg
atcctgcacctcgatcccgacgtgaagctggtcagcctgtcggcgacggtgagcaacgcc
gaggagttcggggactggatcaagaccgtgcgcggcgacaccaccgtcgtcgtcgacgac
caccgaccgatcccgctgtggcagcacatgatggtcggcaaccgcatcttcgacctgttc
gaccagcgcatccgtcccggcgaacgcccgcaggtcaacggtgagctgacgcgctacatc
aagcagcgcgagatggtggaggaccaccagcgcgcgcacagcggtcggggtgcgcgtgga
cggccccagcgcgggcgtccgaccggcaccatctcccgacccgacctgatcgcgcgcctc
gaccgcgacgggctgctcccggccatcgggttcatcttctcccgcgcgggatgcgaggcc
gcgctcgaacagtgcgtgcggtccggactgaacctcctcgaacctgaccaggccgagcag
gtcgccgaggtcgtcgcccgctacaccggcgagttctcgccgtcggaccgcgagatcctg
cgcgtcgacagctgggagagcggtctgcggcgcggcctcgccgcccatcatgcggggatg
ctgccggcgttccggcacgcggtcgaggaactgttcgtccgcggactggtccgcgcggtg
ttcgcgaccgagaccctcgcgctggggatcaacatgccggcccggtcggtcgtgctcgag
cgactcgtcaagttcaacggcgagtcgcacgtcgatctgacccccggcgagttcacacag
ttgaccggtcgcgccggtcgccgcggcatcgacgtcgagggtcacgcggtggtcgtgtgg
atgcccggtctcgacccgacgcgggtcgccggcctggccggagcgcggaccttcccgctg
cgcagctccttcgcgcccgagtacaacatggcgatcaacctcatcggtcgcctcggcctg
gccggcgcgaagaacctcctcgagcggtcgttcgcgcagttccagaccgaccgctcggtg
gtcggccagcaccgacagatcgacaaggcgcgcgttatcctgcgcaagatcgacaccgaa
ctcgtcggccgcgcaagcggtctcggcatcgaccccggccgtctcgcacccgacgagccg
gtcggtgacgcgtcggcctacgacggtttcctcggatacatgacgctgcgcgaggacatc
cggacccgcgaacgcgatctgaagttccacaagcggatgaccctgcaggccaacaccgtc
gacgagctcttcggcctcaagcgcggtcacgtgatcggcctccacgggggtcgtcaccgc
ggcctggccgtggtcatcgagcccgccaacgaccgccgcgaccccaaaccactcgtcctg
tgcgaggacgggtgggccggccgggtcggggtctcggacttcctgaacccgcccgaggtc
gtcggtaacatgcggttgccacggcaggtcgaccatcggacgggccgtggccggcgtgat
ctggcctcgtcgctgcgcaacaccggcctgtcggtgccgaagggccgcaacaccaagcgt
tccccggccgccgacgacggcgaactggccgatctgcgtgctcggctccgcgcgcatccg
gcgcacgagctgtcgagccacgacgagctgttccgtctcgccgagcgtcgcaatcggtcg
ctccgcgagatcacgaacctgacgtcgtcggtggacacgcggacctcgacgctgagcgtc
accttcgatcgcatcgtggccgtgctcaccgaactcggttaccttctggccgacgtcgat
gccgagggcgcgccgcgcatggtggtcaccgagtccgggtcgacactgagccgcgtctac
agcgagagcgacctgctgatctgcgagtgcatccgtgccggcgtgtgggatgcgttgaca
ccgccagagctcgccgcggtcgtgtcatcggtggtctacgaatcgcggcgcgacacctac
tccggacccgacctcgtcaccgggaacccgaccctgcgcgagaccctgtcggcgacccac
aagcagtggcgcacgctgtcggccctggagaaccgccacggtgtcggcgtgacccgcgaa
cccgacgcgggattcgcgaccgcgatgtacacctgggccgcgggccggtcgctcggtgag
gcgttggccgtcgcgggtgaacgcgggcggccgctgccggccggtgacttcgtccggtgg
tcgcggcaggtcatcgatctcctcgagcagatccgcatgagcgccggcgccgaggggcgt
ctggcccgctcggcgaagtcggccgtggggtgcatcaaacgcggtgtcgtcgcggtcgaa
ctcggctga
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