Williamsia herbipolensis: OG579_03925
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Entry
OG579_03925 CDS
T09708
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
whr
Williamsia herbipolensis
Brite
KEGG Orthology (KO) [BR:
whr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
whr03021
]
OG579_03925
Transcription machinery [BR:
whr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OG579_03925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
DUF7343
HTH_Crp_2
MarR
KORA
HTH_3
HTH_23
HTH_24
Trypco1
GerE
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
WUM20977
UniProt:
A0AAU4K4S7
LinkDB
All DBs
Position
complement(865238..866107)
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AA seq
289 aa
AA seq
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MHPDYSSPSTTSPQPLPAPARLHGRRERGRPRRDDDYADVAHRIAALAQLDGGSHEFICA
RDDVIARCLPLADNVARRFGGRGEAFDDLVQVARLGLVNAVDRFDPARGSDFLSFAVPTV
MGEVRRHFRDSTWSLRVPRRTKENYMQIAKVSDAMLQRLGRAPRPSEIAVEMDLDLDAVV
DGLVARSAYHAGSIDAEITSDASTMRLQDTLGDIDERMGAVEHVATLRPALARLTDRERQ
IVGLRFFGSMSQSQIAERIGISQMHVSRILSKTLAALRADLDDAALDGV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcaccccgactactcctccccgtcgacgacatccccgcagccgctccccgcgcccgca
cggctccatggccgtcgtgagcgtggacgaccgcgccgcgacgacgactacgccgacgtg
gcgcaccgtatcgccgcgttggcgcagctggacggtgggtcgcacgaattcatctgcgcg
agagacgatgtgatcgcacggtgtctgccgttggcggacaacgtcgcccgtcggttcgga
gggcggggtgaggcgttcgacgatctcgtccaggtcgcccgcctcgggttggtcaacgcg
gtcgaccggttcgatcccgcacgtggctccgatttcctgtcgttcgccgtgcccaccgtg
atgggtgaggtacggcgccacttccgggattccacgtggtctcttcgtgtcccacggcgg
acgaaggagaactacatgcagatcgcgaaggtctccgatgccatgttgcagcggttgggc
cgcgcgcctcggcccagtgagatcgccgtcgagatggatctcgacctcgatgcggtggtc
gacggcctcgtcgcccggtcggcgtaccacgcgggctccatcgacgccgagatcaccagc
gatgcgtccaccatgcgtttacaggacacactgggcgacatcgacgaacgcatgggtgct
gtcgaacatgtcgccacgctgcggcccgcgctcgcacggctgaccgatcgagagcgccag
atcgtcgggctccgtttcttcggttcgatgtcgcagtcgcagatcgccgagcgcatcggc
atatcgcagatgcatgtctcgcggatcctctcgaagacactggccgcgctgcgagcagat
ctcgacgacgcagccctcgacggcgtctga
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