Williamsia herbipolensis: OG579_04165
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Entry
OG579_04165 CDS
T09708
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
whr
Williamsia herbipolensis
Pathway
whr03030
DNA replication
whr03430
Mismatch repair
whr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
whr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OG579_04165 (dnaE)
03430 Mismatch repair
OG579_04165 (dnaE)
03440 Homologous recombination
OG579_04165 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
whr03032
]
OG579_04165 (dnaE)
03400 DNA repair and recombination proteins [BR:
whr03400
]
OG579_04165 (dnaE)
Enzymes [BR:
whr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OG579_04165 (dnaE)
DNA replication proteins [BR:
whr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OG579_04165 (dnaE)
DNA repair and recombination proteins [BR:
whr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OG579_04165 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
WUM21018
UniProt:
A0AAU4K4I0
LinkDB
All DBs
Position
complement(921592..925146)
Genome browser
AA seq
1184 aa
AA seq
DB search
MSDSFVHLHNHTEYSMLDGAAKVAPMFAEAKRLGMTAIGMTDHGNMFGASEFYNVAKDHD
ITPIIGIEAYIAPASRFDTKRVLWGDRDQKSDDVSGSGAYTHMTMVAENATGLRNLFTLS
SLASIEGQLGKWARMDAELIAAHAEGIIATTGCPSGEVQTRLRLGHQREALEAAAKWQDI
FGKENFYLELMEHGLEIERRVRDGLLEIGRQLGIKPIVTNDCHYVTKGHAVTHEALLCIQ
TGKTLSDPTRFKFDGDGYYLKSAAEMREQWDDVVPGACDNTVEIGERVQSYAEVFTPRDR
MPIFPVPEGDTQETFLRKEVTAGLARRFPDAPVPQDYTDRANYELDVIIQMGFPAYFLVV
GDLIRHAHEVGIRVGPGRGSAAGSLVAWALGITNIDPIPHGLLFERFLNPERVSMPDIDI
DFDDRRRGDMVRYATERWGSDKVAQVITFGTIKTKAAIKDSARVQFGQPGYAIADRITKA
LPPPIMAKDISVAGITDPDHDRYGEASEVRALIETDPDVKKIYDTALGLEGLIRNAGVHA
CAVIMSSEPLTEAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVINDALENI
TTNRGIEIDMDTLPLDDTTTYELMARGQTLGVFQLDGGPMRELLKRMQPTTFEDIVAVGA
LYRPGPMGMNAHNDYADRKNGRQDVKPIHPELAEPLKDILGDTYGLIVYQEQIMQIAQKV
AGYSLGRADILRRAMGKKKASVLAQEFEGFEAGMVANGFSKAAIKALWDTILPFAGYAFN
KSHAAAYGLVSYWTAYLKANYPAEFMAGLLTSVGDDKDKAAIYLADCRKLGITVLPPDVN
ESQRYFAAVGEDIRFGLVAVRNVGTNVVTAILAAREEKGKFHSFSDYLGKIDVTACSKKV
TESLIKAGAFDSLGHPRKGLFLVHVDAVDAVLGTKKAEAVGQFDLFGDAGGADDAGAVID
DVFAVRVPDEEWDTKHKLALEREMLGLYVSGHPLGGIEHVISAQTDTSLTSLLEKNVSDG
AQIVIGGIISAVTRRVNKKGEPYAVVTLEDLVGGVEVYFFPRAFQAYGMDIVADAVVLIK
ARVNIRDDDNMMISANDLAVPDLSHVGEARPLALTMSTRLCTQDRVSALKQVLIRHPGTS
DVHVRLISGESATTLRLDDNLRVTPSSALMGDLKALLGPTCLSG
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggattcgttcgtccatctgcacaaccacaccgagtactccatgctcgacggggcc
gcgaaggtggcgccgatgttcgccgaggccaagcgtctcgggatgaccgccatcggcatg
accgaccacgggaacatgttcggcgccagcgagttctacaacgtcgccaaggatcacgac
atcacgccgatcatcggcatcgaggcctacatcgcccccgcctcgcgcttcgacaccaaa
cgcgtcctgtggggcgatcgcgaccagaagagcgacgacgtctccggtagcggcgcctac
acccacatgacgatggtcgccgagaacgcgaccggcctgcgcaacctgttcaccctgagc
tcgctggcgtcgatcgagggacagctcggcaagtgggcccgcatggacgccgaactcatc
gccgcccacgccgaggggatcatcgccaccaccggctgcccgtcgggtgaggtccagacc
aggctgcggctcggccatcagcgcgaggccctcgaggccgccgcgaagtggcaggacatc
ttcggcaaggagaacttctacctcgagttgatggagcacggcctcgagatcgagcgccgc
gtccgcgacggtctgctcgagatcggcaggcagctcggcatcaagccgatcgtcaccaac
gactgccactacgtcaccaagggtcacgcggtgacccacgaggcgctgctgtgcatccag
accggcaagacgctgtcggatcccacgcgcttcaagttcgacggcgacgggtactacctg
aagtcggccgcggagatgcgcgagcagtgggacgacgtggtgcccggcgcctgcgacaac
accgtcgagatcggtgagcgggtccagagctacgccgaggtgttcaccccacgcgaccgg
atgccgatcttcccggtgcccgagggcgacacccaggagacgttcctgcgcaaggaggtc
accgcggggttggcccggcgtttccccgacgcacccgtgccgcaggactacaccgaccgc
gcgaactacgaactcgatgtcatcatccagatgggctttcccgcctacttcctcgtcgtc
ggcgacctcatccggcacgcccacgaggtcgggatccgcgtcggccccggccgcggcagc
gccgccggatcgctcgtcgcgtgggcgctgggcatcaccaacatcgatcccatcccgcac
ggtctgctcttcgagcggttcctcaaccccgagcgtgtgtcgatgcccgacatcgacatc
gacttcgacgaccgtcgccgcggggacatggtccgctatgccaccgaacgctggggcagc
gacaaggtcgcccaggtcatcaccttcggcaccatcaagaccaaggccgcgatcaaggac
tcggcgcgggtgcagttcggtcagcccggctacgccatcgccgaccggatcaccaaggcg
ctgccgccgcccatcatggccaaggacatatcggtcgccgggatcaccgaccccgaccac
gatcgctacggcgaggcctcggaggtccgtgcgctcatcgagaccgaccccgacgtcaag
aagatctacgacaccgcactgggtctcgaaggactgatccgcaacgccggcgtgcacgcc
tgcgcggtgatcatgtcctcggagccgctcaccgaggcgatcccggtgtggaaacgcgcc
caggacggcgccatcatcaccggctgggactacccgtcgtgtgaggccatcgggctgctc
aagatggacttcctcgggctgcgcaacctgacggtcatcaacgacgcgctcgagaacatc
accaccaaccgcggcatcgagatcgacatggacacgctgcccctcgacgacaccacgacc
tacgagttgatggcgcgcgggcagaccctcggcgtgttccagctcgacggtgggccgatg
cgtgaactgctcaaacgcatgcagcccaccaccttcgaggacatcgtcgccgtcggcgcc
ctctaccggcccggccccatgggcatgaacgcccacaacgactacgccgaccgcaagaac
ggtcgacaggacgtcaagccgatccaccccgagctggccgaacccctcaaggacatcctc
ggcgacacctacggcctcatcgtctaccaggagcagatcatgcagatcgctcagaaggtg
gccgggtactcgctgggtcgagccgacatcctgcgtcgcgcgatgggcaagaagaaggcg
tcggtgctggcccaggagttcgaggggttcgaggcgggcatggtcgccaacggcttctcc
aaggcggccatcaaggcgctctgggacaccattctcccgttcgccggctacgcgttcaac
aagtcccacgcggccgcctacggtttggtgtcgtactggacggcgtacctcaaggccaac
tacccggccgagttcatggcgggactgctcacctcggtcggcgacgacaaggacaaggcc
gcgatctacctcgccgactgccgcaagctgggcatcacggtcctcccgcccgacgtcaac
gagtcgcagcggtacttcgccgccgtcggcgaggacatccgcttcggcctggtcgcggtg
cgcaacgtggggaccaacgtggtcaccgcgatcctcgccgcgcgtgaggagaaggggaag
ttccacagcttctcggactacctcggcaagatcgatgtcaccgcctgcagcaagaaggtc
accgaatccctcatcaaggcaggcgctttcgactcgctgggacacccccgcaaggggttg
ttcctggtgcacgtcgacgccgtcgacgcggtcctgggcacgaagaaggccgaggccgtc
ggccagttcgacctgttcggtgacgccggcggtgccgacgacgccggtgcggtgatcgac
gacgtcttcgccgtccgggtgcccgacgaggagtgggacaccaagcacaagctcgcgctc
gaacgggagatgttggggctctacgtgtccgggcatccgctcggcggcatcgagcacgtc
atctcggcgcagaccgacacctcgctgaccagcctgctggagaagaacgtctccgacggc
gcgcagatcgtcatcggcggcatcatctccgcggtcacccgccgggtcaacaagaagggc
gagccgtacgcggtggtcaccctcgaagatctcgtcggtggtgtggaggtgtacttcttc
ccgcgcgcgttccaggcctacgggatggacatcgtggccgacgcggtggtgctcatcaag
gcccgggtcaacatccgcgacgacgacaacatgatgatcagcgccaacgatctcgcggtg
cccgacctctcacacgtgggtgaggcgcgcccgctcgccctgacgatgtcgacacgactg
tgcacgcaggatcgggtgagtgccctcaagcaggtgctgatccgtcatccggggacctcg
gatgtccacgtgcggctcatcagcggcgagtcggcgaccaccctgcgactcgacgacaac
ctccgggtgacgccgagttcggctctgatgggcgacctgaaggcgcttctcgggccgacc
tgcctcagcggctag
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