Williamsia herbipolensis: OG579_05405
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Entry
OG579_05405 CDS
T09708
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
whr
Williamsia herbipolensis
Brite
KEGG Orthology (KO) [BR:
whr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
whr03032
]
OG579_05405
03036 Chromosome and associated proteins [BR:
whr03036
]
OG579_05405
03400 DNA repair and recombination proteins [BR:
whr03400
]
OG579_05405
DNA replication proteins [BR:
whr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OG579_05405
Chromosome and associated proteins [BR:
whr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OG579_05405
DNA repair and recombination proteins [BR:
whr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OG579_05405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
WUM21237
UniProt:
A0AAU4K5F0
LinkDB
All DBs
Position
complement(1190849..1191466)
Genome browser
AA seq
205 aa
AA seq
DB search
MNKAELIEVLTDKLGTDRKTATDAVEHVVDTIVRAVNKGESVTITGFGVFEKRKRAARVA
RNPRTGETVKVRPTSVPAFRPGAQFKAVVAGKQKLSATGPAVKRGSGATTTATKTAAKKA
PAKKAAPAKKAAPAKKTVAKKTAPVKKAVAKKTAPVKKAVAKKTAPVKKTVAKKTAPVKK
AVAKKTAPVKKAAAKKAPARKARAR
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagaactcatcgaggtgctgacggacaagttgggcaccgatcggaagacg
gccaccgacgccgtcgagcacgtggtcgacaccatcgttcgtgcggtgaacaagggtgag
agcgtgacgatcaccggtttcggtgtcttcgagaagcgcaagcgcgccgctcgcgtcgcc
cgcaacccgcgcaccggagagaccgtgaaggtgcgtcccacctcggtgccggcgttccgt
cccggagcccagttcaaggccgtcgtcgccggcaagcagaagctgagcgcgaccggtccc
gcggtcaagcgcggcagtggtgcgaccaccaccgcgaccaagaccgccgcgaagaaggcc
ccggccaagaaggccgcgcccgcgaagaaggctgcccccgcgaagaagacggtcgcgaag
aagaccgctccggtgaagaaggccgtcgcgaagaagaccgctccggtgaagaaggccgtc
gcgaagaagaccgctccggtcaagaagacggtcgcgaagaagaccgctccggtgaagaag
gccgtcgcgaagaagaccgctccggtcaagaaggccgccgcgaagaaggctccggcccgc
aaggcccgcgcacgctga
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integrated database retrieval system
