Williamsia herbipolensis: OG579_06325
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Entry
OG579_06325 CDS
T09708
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
whr
Williamsia herbipolensis
Pathway
whr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
whr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OG579_06325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
whr03000
]
OG579_06325
03400 DNA repair and recombination proteins [BR:
whr03400
]
OG579_06325
Enzymes [BR:
whr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
OG579_06325
Transcription factors [BR:
whr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
OG579_06325
DNA repair and recombination proteins [BR:
whr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OG579_06325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF7437
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WUM21404
UniProt:
A0AAU4K5T8
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All DBs
Position
1374580..1376133
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AA seq
517 aa
AA seq
DB search
MTPAVATSPDLDFERCYRAVSARDSRFDGQFFVAVRTTGIYCRPSCPAVTPRAENVDFVV
TAAAAQQGGFRACRRCLPDAVPGSPRWNLSGDLAARAMRLIGDGLVDRDGVDGLSAALGY
SPRQLNRVLTEELGAGPLALARANRATNARILIECTAMPMADIAFASGFASVRQFNDTVR
EVFASTPSEMRRRRAGTVAATRDTTVDTDRPALNVRLKLSVRQPFSPEWLTWFLAGHVIE
GLEHFDGTTYHRSLSLPAGAATASLTMHPDHVSADISGVDVRDLGTAVHRLRRLLDLDAD
IVAVDESLSGDADLAPLVARRPGIRVPGAVDGFETLMRTMLGQQISLAAARTHGRRLVAA
LGEPLGPDIGTAPVTHLFPTPAAVAEHGHTVLTGPKRRVASIIAVAQAVAEDAIPLHTGV
AADEMREHLMALPGIGRWTADYVAMRVLGDPDVLLDTDLILRRRADHLGLDLTDARRWSP
WRSYVSMHLWHDALRETEPLLHGERPSTTTTTHEETS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgacacccgcggtggccacctcgcccgatctggacttcgaacgctgctatcgcgcggtg
tcggcccgcgacagcaggttcgacggtcagttcttcgtcgccgtccgcaccaccggtatc
tactgccgtccgtcgtgtccggccgtcacgccgcgcgccgagaacgtcgacttcgtggtc
accgccgccgcggcccagcagggagggttccgcgcctgccgtcgatgtctccccgacgcg
gtaccgggatcgccgcgctggaacctctccggcgacctcgccgcgcgggccatgcggctc
atcggcgacgggctcgtcgaccgcgacggcgtcgacgggttgtcggcggccctgggctac
tcgccgcgccagctcaaccgggtgctcaccgaggaactcggggccggaccgctggccctg
gcccgcgccaaccgggcgacgaacgcgcggatcctcatcgaatgcaccgcgatgccgatg
gccgacatcgccttcgcgtcggggttcgcgagcgtacggcagttcaacgacaccgtgcgc
gaggtcttcgcgagcacacccagcgagatgcgccgccgccgtgcgggcaccgtcgccgcc
acgcgtgacacgacagtcgacaccgaccgccccgccttgaacgtgcggctcaaactgtcc
gtgcggcagccgttctcaccggaatggctcacctggttcctcgccggccacgtgatcgag
ggcctcgaacacttcgacggcaccacctaccaccggtcgctgtcgctgcccgcgggggcg
gcgaccgcgtcgctgaccatgcaccccgatcacgtgagcgccgacatcagcggagtcgac
gtccgcgatctcggcaccgcggtccaccgcttgcgacggttgctcgacctcgacgccgac
atcgtcgcagtcgacgagagcctgagcggcgacgccgatctcgccccgctggtggcacgc
cgccccggcatccgggtacccggcgcggtcgacggattcgagaccctgatgcgcaccatg
ctcggccaacagatcagtctcgccgccgcacgcacccacggtcggcgactcgtggccgcc
ctcggtgaacccctgggcccggacatcgggaccgcgccggtgacacacctgttccccaca
cccgccgccgtcgccgaacacggccacaccgtgctcaccggaccgaaacgacgcgtcgcg
tcgatcatcgccgtcgcccaggcggtcgcggaggacgcgatccccctgcacaccggggtc
gcggccgacgagatgcgcgaacacctcatggccctacccggcatcggacgatggaccgcc
gactacgtggcgatgcgcgtgctcggtgatcccgacgtcctgctcgacaccgacctcatc
ctgcgacgcagggccgaccatctcggtctcgatctcaccgacgcgcggcgatggtcgccg
tggcggtcatacgtgtcgatgcacctgtggcacgacgcgctccgggagacggaaccgttg
ctgcacggcgaacgtccgagtacgacaaccacgacacacgaggagacatcatga
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