Williamsia herbipolensis: OG579_19550
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Entry
OG579_19550 CDS
T09708
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
whr
Williamsia herbipolensis
Pathway
whr03420
Nucleotide excision repair
whr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
whr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OG579_19550
03430 Mismatch repair
OG579_19550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
whr03400
]
OG579_19550
Enzymes [BR:
whr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OG579_19550
DNA repair and recombination proteins [BR:
whr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OG579_19550
MMR (mismatch excision repair)
Other MMR factors
OG579_19550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WUM22476
UniProt:
A0AAU4K8U7
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All DBs
Position
4204118..4206547
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AA seq
809 aa
AA seq
DB search
MSGDALTDRARELLDGLNPQQRAAVMHTGGPLLIVAGAGSGKTSVLTRRIAYLLAQRDVS
PGEVLAITFTNKAAAEMRERVIELVGPRANRMWVSTFHSTCVRILRAQAALIESRNSNFS
IYDADDSKRLLAMIVRDLDLDPKKFSPRGSGIHISNLKNELISPESATATAAEADDDTAT
TLADIYTRYQARLRAANAFDFDDLIGETVALLQNHPEVAEYYRRRFRHVLVDEYQDTNHA
QYVLVRELVGTGEGAVSPSELCVVGDADQSIYAFRGATIRNIEEFERDFPDTETVLLEQN
YRSTQTILSAANAVIARNPNRREKKLWTDAGEGELIAGYVADNEHDEASFIAREIDSLCD
SGEFTYSDVAVFYRTNTGSRSLEDIFIRLGIAYKVVGGVRFYERKEVRDIVAYLRVVANP
DDTVSLRRIVNTPKRAIGDRAQACVAVYSENAGVSFYQALIDAAAGNVPLLNSRAVKQIS
GFVDLIEGLRNDFLAVFGESDTPDADTTTIDAGSESADIGELVEAIAHRSGYRDELEGSS
DPQDGARLDNVNELISVAREFSADAAALDPADRPDPEEGLPEPGSLAAFLERVSLVADAD
QVPDSAAGMVTMMTLHTAKGLEFPVVFVTGWEDGQFPHMRALGDPAELSEERRLAYVGIT
RARKRLYVTRSMVRSAWGQPVSNPESRFLQEIPQHLIDWRRTEPRRRERSFGSSGGFFGS
DSFRSGGNGDGGGERSSARGRSSYSASPTRGRNNQVSVAVGDRVNHAKYGMGKVVAKEGS
GATERVTFDFGSSGRITLMSLGGLPVDKL
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgacgccctcaccgatcgcgcccgcgagctcctcgacggcctcaacccgcag
caacgcgccgccgtgatgcacaccggcggccccctgctgatcgtcgcgggcgccggatcg
ggcaagacctcggtgctcacccgacgcatcgcctacctgctcgcccagcgcgacgtctcg
cccggcgaggtgctcgccatcacgttcaccaacaaggccgccgccgagatgcgcgagcgg
gtgatcgagctcgtcggcccccgcgcgaaccgcatgtgggtctcgacgttccactcgacc
tgtgtgcggatcctgcgtgcgcaggccgcactcatcgagagccgcaactcgaacttctcc
atctacgacgccgacgactccaagcgactgctggcgatgatcgtgcgcgacctcgacctc
gacccgaagaagttcagcccgcgcggctcgggcatccacatctcgaacctgaagaacgag
ctcatcagccccgagtcggcgaccgccaccgccgccgaggccgacgacgacaccgccacc
accctcgccgacatctacacgcggtaccaggcgcgtctgcgggcggcgaacgccttcgac
ttcgacgatctcatcggcgaaaccgttgcgctgctgcagaatcaccccgaggtcgccgag
tactaccgacgtcgcttccggcacgtgctggtcgacgagtaccaggacaccaaccacgcc
cagtacgtcctggtgcgtgagctggtgggcaccggcgaaggtgcggtcagcccgtcggaa
ctgtgcgtggtcggtgacgccgaccagtcgatctacgcgttccgcggcgcgacgatccgc
aacatcgaggagttcgagcgcgacttccccgacaccgagaccgtgctgctggaacagaac
taccgctccacgcagacgatcctgtcggcggccaatgcggtgatcgcacgcaaccccaac
cggcgcgagaagaagctgtggaccgacgccggcgagggtgagctgatcgccggttacgtc
gccgacaacgagcacgacgaggcgtcgttcatcgcccgcgagatcgactcgctgtgcgac
agtggcgagttcacgtactccgacgtcgcggtgttctaccggacgaacaccggttcgcga
tcgctggaggacatcttcatccgcctcggcatcgcgtacaaggtcgtcggcggcgttcgg
ttctacgaacgcaaggaggtccgcgacatcgtcgcgtacctgcgcgtggtggccaacccc
gacgacaccgtgagcctgcgacgcatcgtcaacacccccaagcgtgccatcggtgaccgt
gcccaggcatgtgtcgcggtgtactccgagaacgcaggcgtcagcttctaccaggcgctg
atcgacgccgccgcgggcaacgtgccgctgctcaacagtcgtgccgtcaaacagatctcg
ggtttcgtcgacctcatcgagggcttgcgcaacgacttcctggcggtgttcggcgagtcc
gacacccccgacgccgacaccaccaccatcgacgccgggtcggagagcgccgacatcggt
gaactcgtcgaggccatcgcccaccgctcggggtaccgggacgagctggagggttcgagc
gacccacaggacggcgcgcgcctcgacaacgtcaacgagttgatctccgtcgcaagggag
ttcagcgccgacgccgccgcgctcgatcccgccgaccgccccgacccggaggagggcctt
cccgagcccggttcgctcgccgcgttcctcgagcgtgtgtcgctggtcgccgacgccgat
caggtgcccgacagcgccgcggggatggtgacgatgatgacgctgcacaccgcgaagggg
ctggagttcccggtcgtgttcgtcaccgggtgggaggacgggcagttcccgcacatgcgc
gccctgggcgaccccgccgagctcagcgaggagcgacgactcgcctacgtcggtatcacg
cgtgcccgcaagcggctctatgtcacgcggtcgatggtgcgttcggcgtggggacagccc
gtgtcgaatccggaatcgcgtttcctgcaggagatcccgcagcatctcatcgattggcgc
cgcaccgagccccgacgccgtgagcggtcgttcggcagttccggcggcttcttcggctcc
gactcgttccgctccggcggcaacggcgacgggggtggcgagcgcagttcggcccgtggt
cgcagctcgtattcggccagtcccacgcggggacgcaacaaccaggtgtcggtcgcggtc
ggcgaccgcgtgaaccatgccaagtacggcatgggcaaggtggtcgcgaaagagggatcg
ggggccaccgagcgggtgaccttcgacttcggcagcagcggccggatcacgctgatgtca
ctgggcggtctgcccgtggacaagctctag
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