Williamsia herbipolensis: OG579_21250
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Entry
OG579_21250 CDS
T09708
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
whr
Williamsia herbipolensis
Pathway
whr00020
Citrate cycle (TCA cycle)
whr00190
Oxidative phosphorylation
whr00650
Butanoate metabolism
whr00720
Other carbon fixation pathways
whr01100
Metabolic pathways
whr01110
Biosynthesis of secondary metabolites
whr01120
Microbial metabolism in diverse environments
whr01200
Carbon metabolism
Module
whr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
whr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
whr_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
whr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OG579_21250 (sdhA)
00650 Butanoate metabolism
OG579_21250 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
OG579_21250 (sdhA)
00720 Other carbon fixation pathways
OG579_21250 (sdhA)
Enzymes [BR:
whr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
OG579_21250 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
DAO
Thi4
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
WUM20176
UniProt:
A0AAU4K2G6
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All DBs
Position
complement(4559329..4561083)
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AA seq
584 aa
AA seq
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MQEHRYDVLIVGAGGAGMRAAIEAGPRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYIADQDAVEIMCKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKSPVRRSCYAADRTGHMILQTLYQNCVKNDVEFFNEFYALDLCLSENEAGEQVATG
VVAYELATGEIHVFHAKSVILATGGSGRMYKTTSNAHTLTGDGMGIVFRKGLPLEDMEFH
QFHPTGLAGLGILISEAVRGEGGILRNADGERFMERYAPTIKDLAPRDIVARSMVLEVLE
GRGAGPNKDYVYIDVTHLGAEVLEEKLPDITEFARTYLGVDPVTEYVPVFPTCHYAMGGI
PTNIRGEVLSDPDTVVKGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIYASEYAE
KAEFVALPENPTSMVDNWLELVLSEHGHERVADIRTELQASMDANASVFRTEETLKQALT
DIHGLKERYNHIRVHDKGTRYNSDLLEAIELGFLLEMAEVTVVGALNRKESRGGHAREDY
PDRDDTNYMRHTMAYKKGSELLSDIELGWKPVVQTRYEPMERKY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaacatcgctacgacgtcctcatagtcggtgccggtggcgcgggtatgcgcgca
gccatcgaggccggcccccgagcgcggaccgccgtgctcaccaagctctatcccacgcgc
agccacaccggcgcggcccagggcggcatgtgtgccgcgctggccaacgtggaagaggac
aactgggagtggcacacgttcgacaccgtgaagggcggcgactacatcgccgaccaggac
gcggtcgagatcatgtgcaaagaggcgatcgacgccgtcctcgacctcgagaagatgggg
ctgccgttcaaccgcacccccgagggcaagatcgaccagcgtcgcttcggcggccacacc
cgtgaccacggcaagagccccgtccgccggtcgtgctacgccgccgaccgcaccggtcac
atgatcctgcagacgctctaccagaactgcgtgaagaacgacgtcgagttcttcaacgag
ttctacgctctcgacctctgcctgtcggagaacgaggccggcgagcaggtcgccaccggc
gtcgtcgcctacgagctggccaccggcgagatccacgtgttccacgcgaagtcggtcatc
ctcgccaccggcggttcgggtcggatgtacaagacgacgtcgaacgcccacaccctcacc
ggtgacggcatgggcatcgtcttccgcaagggactccccctcgaggacatggagttccac
cagttccatccgacgggcctcgcgggcctgggcatcctcatctccgaggcggtccgcggc
gagggcggcatcctccgcaacgccgacggcgagcggttcatggagcgctacgcccccacc
atcaaggacctcgcacctcgcgacatcgtcgcgcgctcgatggtcctggaggtgctggag
ggccgcggcgccggaccgaacaaggactacgtctacatcgacgtgacccacctgggtgcc
gaggtgctcgaggagaagctccccgacatcaccgagttcgcccgcacctacctcggtgtc
gatccggtgaccgagtacgtgcccgtcttcccgacgtgccactacgccatgggcggtatc
ccgaccaacatccgcggcgaggtcctctccgaccccgacaccgtggtgaagggtctctac
gccgccggtgagtgtgcgtgcgtctcggtgcacggcgcgaaccgtctgggcaccaactcg
ctgctggacatcaacgtgttcggtcgtcgcgccgggatctacgcctcggagtacgccgag
aaggcggagttcgtcgcgctgcccgagaacccgacctcgatggtcgacaactggctcgag
ctggtgttgtccgagcacggtcacgagcgtgtcgccgacatccgcacagagctgcaggcg
tcgatggacgccaacgcgtcggtgttccgcaccgaggagacgctcaagcaggcgttgacc
gacatccacggtctcaaggagcggtacaaccacatccgggtgcacgacaagggaacccgg
tacaacagcgacctgctcgaggccatcgagctcgggttcctgttggagatggccgaggtc
accgtcgtcggtgcgctcaaccgcaaggagtcgcgcggcggacacgcccgcgaggactac
cccgatcgcgacgacaccaactacatgcgccacacgatggcctacaagaagggcagcgag
ctgctctcggacatcgaactgggctggaagcccgtggtgcagacccgctacgaaccgatg
gagcgcaagtactga
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