Williamsia herbipolensis: OG579_21810
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Entry
OG579_21810 CDS
T09708
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
whr
Williamsia herbipolensis
Pathway
whr00300
Lysine biosynthesis
whr00470
D-Amino acid metabolism
whr01100
Metabolic pathways
whr01110
Biosynthesis of secondary metabolites
whr01120
Microbial metabolism in diverse environments
whr01230
Biosynthesis of amino acids
Module
whr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
whr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OG579_21810 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OG579_21810 (lysA)
Enzymes [BR:
whr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
OG579_21810 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WUM20273
UniProt:
A0AAU4K2L4
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All DBs
Position
4687879..4689300
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AA seq
473 aa
AA seq
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MMAHPAGPRHAEDAPRSHPSERPASTDELVELPAAVWPRNATRRDDGVVTLAGVGVDALA
AEHGTPLFVIDEADFRSRCADMLAAFGATGRVHYASKAFLCTEIARWVEQEGLSLDVCSG
GELTVALRAGFPAHRIALHGNNKSPEELQQAVESGVGHIVVDSAIEIERLDAAAGAAGVV
ADVLIRVTVGVEAHTHEFISTAHEDQKFGFSLSGGVAMDAVRRVFAADNLRLVGLHSHIG
SQIFDLDGFELAAHRVLGLLSDVVAEFGVDKTAQLSVLDLGGGLGISYIPSDDPPPVDEV
AATLVDIVTRQSAQLGLPTPILAVEPGRAIAGPGTVTLYRVGTVKDVAIGGGAHRRYVSV
DGGMSDNIRTSLYQAEYDVRLVSRTSAATAVVSRVVGKHCESGDIVVKDCWLPSDVAPGD
LLAVAATGAYCYTMSSRYNMATRPAVVAVRDGVSRPVLRRETVADLLSLEVTE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgatggcccaccccgcgggtccccgccacgccgaggacgcaccgcgctcgcacccgtcg
gagcgtcccgcgtcgaccgacgagctcgtcgagctgcccgccgcggtgtggccgcgcaac
gccacccgtcgcgacgacggtgtcgtgacgctggccggagtcggtgtcgacgcactcgcc
gccgaacacgggacacccctgttcgtcatcgacgaggccgatttccgttcacgctgtgcc
gacatgctcgccgcgttcggcgcgaccggtcgggtgcactacgcctcgaaggcgttcctg
tgcaccgagatcgcgcgatgggtcgagcaggagggcctctcgctcgacgtctgctcgggt
ggcgagctcaccgtcgcgctgcgcgccgggttccccgcccatcggatcgcgttgcacggc
aacaacaaatcgcccgaggaactgcagcaggcggtcgagagcggggtcggacacatcgtg
gtcgactcggccatcgagatcgaacgcctcgacgccgccgccggtgcggccggggtcgtc
gccgatgtcctgatccgcgtgaccgtcggcgtcgaggcccacacgcacgagttcatctcc
accgcccacgaggaccagaagttcgggttctcgctcagcggcggtgtcgcgatggacgcg
gtgcgccgtgtcttcgccgccgacaacctccgactcgtgggcctgcacagccacatcggg
tcgcagatcttcgatctcgacggcttcgaactcgccgcccatcgagtgctgggtctgctc
agcgacgtggtcgccgagttcggcgtcgacaagaccgcccagctgtcggtgctcgatctc
ggtgggggactgggaatctcgtacatccccagcgacgacccgccgccggtcgacgaggtc
gccgcgaccctcgtcgacatcgtgacccggcaatctgcccagctcggactgcccaccccg
atcctcgccgtcgagccgggacgcgcgatcgccggtcccggcacggtcaccctgtaccgc
gtcggcacggtgaaggacgtcgccatcggcggtggcgcacaccgtcgctacgtgtcggtc
gacggcggcatgagcgacaacatccgcacctcgctgtaccaggccgaatacgacgtccgg
ctggtgtcacgcacctcggcggccaccgccgtggtcagccgcgtcgtcggaaagcactgc
gagagcggcgacatcgtcgtcaaggattgctggctgccgtccgacgtggcccccggtgac
ctcctcgccgtggcggcgaccggtgcgtactgctacacgatgtcgagccggtacaacatg
gcgacgcgtccggccgtggtggccgtgcgtgacggtgtgtcgcgaccggtgctgcgacgg
gagaccgtcgcggatctgttgagtctggaggtgaccgaatga
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