Wallemia ichthyophaga: J056_000033
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Entry
J056_000033 CDS
T03457
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
wic
Wallemia ichthyophaga
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wic03400
]
J056_000033
Enzymes [BR:
wic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
J056_000033
DNA repair and recombination proteins [BR:
wic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J056_000033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
20372985
NCBI-ProteinID:
XP_009265706
UniProt:
R9AQW7
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MALDCVILRNQCFQVECANCNKQTWSGCGLHKNAVSPRENPQRRPLQLQVRRQWGNTFKN
PPIDVDDLNAMRILSWNINGTRRILRNYQNCDDMLRSLDADIVCVQETKMLKGAVNSSQA
ILHGFDSYWSFCHSRSYSGVCIYTRYKALAAEEGLSGGYTTYSLSLPPLAYNQRVQPVSE
IHKHNDDTLLAHNYHPENTNIKQLDTEGRALVLDFGFFVLINVYCPAEGENRGHYKHSFH
EMLFERVKQLKDAGRQVILLGDLNVAHRPFDHCDGIDLTRTDTGRMEFAAKYTRKWMDRL
VSHSDSPLVDVARLLHPNKEGMFTCWNQVINARPSNYGTRIDYVLVTPGLLPWIKEAEIA
PHVYNSDHCPVYIDLHDEMVIKDGNGERAVRLIDLLPPADTSTPPLCAANWDEFNGKQTS
LAGFLKVGKRSQAINESALQNGPQSQSQSQSQLQQESTKHSPQQPKIESFFQPRTRTLDD
THTTPSSPRKYRKDNDTATKTAWKALMAPKKVPKCKVHKEDCKEYTVNKPGPNKGKQFWL
CKRDVGPGYDASGSSSQYRCNYFVWSSQLERDLSGV
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggctttagactgtgtgatcttaagaaaccagtgctttcaagtcgagtgcgcaaactgc
aacaagcaaacctggagtggctgtggactgcacaagaatgccgtgagtcctcgagaaaat
ccccaaagaagaccgctgcagttgcaagtaaggcgtcaatggggaaacacttttaaaaac
cctccaatcgacgtcgatgacctcaatgctatgcgcattctcagctggaatatcaacggc
acacgccgtattttaagaaattaccagaactgtgatgatatgttgcgcagccttgacgcc
gatattgtctgtgttcaggagaccaagatgctgaagggggctgttaactcctcgcaagcc
atccttcatggcttcgactcgtattggtcgttttgccacagtagatcttactccggcgta
tgcatctacacgcgttacaaagcactagctgcagaagagggattaagcgggggatacaca
acatactccttgtcactcccacccctcgcctacaatcagagagtacagccagtctctgaa
atacacaaacacaacgacgacacactcctagcacacaactaccatccagaaaacactaac
atcaagcaactggacacagaagggcgcgcactcgtacttgatttcggtttctttgtcctc
atcaacgtgtattgcccagcagaaggggagaaccgcggccattacaagcactcattccat
gaaatgctttttgagagggtgaaacagctgaaagatgcaggaagacaagtcatactgctc
ggtgatctcaatgtcgctcatcggccattcgatcactgcgacgggatcgatttgacgcgc
actgatacaggcaggatggaatttgctgccaagtacacacgaaagtggatggatcgattg
gttagccattcagactctccgcttgttgatgtggctcgcctcctgcatcctaacaaagaa
ggcatgtttacgtgctggaatcaggttattaatgcaagaccatccaattacggaacgcgc
atcgactatgttctcgtgacacccggtttgctgccgtggattaaggaggctgagatcgca
ccacacgtttacaactcggaccactgccccgtttacatagacctacatgacgagatggtg
ataaaagatggcaatggcgagagggcggtacgtttgatagatcttctaccacctgctgat
acatctacaccaccgttatgtgcagcgaattgggatgagtttaatggtaagcagacttca
ttggcgggatttttgaaggttgggaagagatcgcaagcgataaacgaaagtgcactacaa
aatggaccgcagtcacagtcacaatcacaatcacagttgcaacaagaatctaccaagcac
tccccgcaacagccaaaaatagagtcgttcttccagcctcgcacacgtacactcgacgat
actcataccaccccctcatcacctcggaaataccgtaaagataatgacactgcaactaaa
acagcatggaaagcactgatggcacctaaaaaggtacccaaatgcaaagtacacaaggag
gactgcaaggagtatacggtgaataagccaggtccgaataaaggcaagcagttttggctg
tgcaagcgagacgttggacctggttatgatgcgagtggatcgagtagtcagtatcgatgt
aactactttgtgtggtcctcccagcttgagcgagatttgagtggtgtttaa
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