Wallemia ichthyophaga: J056_000091
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Entry
J056_000091 CDS
T03457
Name
(RefSeq) SWI/SNF chromatin-remodeling complex subunit snf5
KO
K11770
chromatin structure-remodeling complex subunit SFH1
Organism
wic
Wallemia ichthyophaga
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wic03021
]
J056_000091
03036 Chromosome and associated proteins [BR:
wic03036
]
J056_000091
Transcription machinery [BR:
wic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
J056_000091
Chromosome and associated proteins [BR:
wic03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
J056_000091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
20373043
NCBI-ProteinID:
XP_009265764
UniProt:
R9ARB0
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MDDNIDWPVIYQRIRTSFQNALAESIVNKLRKDQFNRSSLYQLLKIAEHKNDDATSLEYL
HGWANSENYDIIPPPKRGPGRPPKSSQPEDDETVDIPYKHVWKTGDPVLLQNTHKPTEKV
GGGQALYTTFPARIKQGISTLMQPVNATLNPQGVIEPKYSNPQKESLAMQAIANSRRKGH
VNYAEKDPDDFEDEGESDDESGSRRRSSRRQTMDGGSTGPSTPLPSGTKRGDQYSYVGPY
LSDIPPGSSIVSEYLDKDRMFRLQYASERDLESSAARTFLPVPIRIEIDHENWRLRDTFV
WNANETVLRPATFAEGLCSDLKIPTRPYADQIASLMQQQIEEHQAVVEVDVSHRERLKEL
SNGGLVTVQTTKPGEDEDDYESNLVYLRERPQERKFAGAKQVEEVDGPPEEQDIAMNLET
DLRVILNLDVQFANFHLVDKVEWDLCSPMPPELFAETLCLDLGLSGEAKAAIAHVIHEEL
IRHKKEAIESGLMGASTGQLSDLDHPLFNGKGPRKLESVWREWHEADEYIPRLNYYAAAD
IEKRELEREKSTRRMRRDISKPGTGFGSRRRYGR
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaatatagactggccggtgatataccagcgaattcggacttcgttccagaat
gcgctggctgagtcaatcgtgaacaagctgagaaaagaccaattcaacagatctagtttg
tatcagctgcttaaaatagcggaacacaagaacgatgacgcgacatcccttgaatattta
catggctgggctaattctgagaactacgatattataccacccccaaaacgtggcccaggt
cgaccaccgaagtcatcccagccggaggatgacgagactgtcgatatcccctacaagcac
gtatggaagactggtgatcctgtgctgctccagaatacacacaaacctacggaaaaagtc
ggtggcggtcaggcactctatacgaccttcccggctaggataaaacagggcatcagcact
cttatgcagccagtcaacgctacccttaaccctcaaggtgttatcgagccaaagtatagc
aatccacagaaagaaagtctggcgatgcaggcgattgctaattcgagaaggaagggtcat
gtgaattatgcagagaaggatccagatgatttcgaggatgagggcgagagtgatgatgag
tccggcagtcgcagacggtcgtcgagacggcagaccatggacggtggatcgactggacca
tccacacccctaccaagtggtaccaagcgtggtgatcaatatagctatgttggtccatac
ctcagcgatatcccaccaggctcgtcgatagtgtccgagtatttagataaggacagaatg
ttcagattgcaatacgcttcagagagagatctcgagagtagcgctgcgagaacattcttg
ccggttccgataaggatagaaattgaccacgaaaattggagactgagagatacattcgtc
tggaatgccaacgagactgtgctcagacccgcgacgttcgcagagggcttgtgcagtgat
ctcaagatcccaaccagaccatacgctgatcaaatagctagcttgatgcagcagcaaatc
gaagagcatcaagctgttgttgaagtagacgtcagtcatagagagcgtctcaaggagttg
agtaatggtggcttagttaccgtccaaaccacaaaaccgggagaagatgaagatgactat
gagagcaacttggtgtatctccgtgaaaggcctcaagagcgcaaatttgcaggcgctaaa
caggtcgaagaggtggatggaccacctgaagagcaagatatagcgatgaatctggagact
gacttgagggtcattttgaatctcgatgtgcaattcgccaacttccacctcgtcgataag
gttgagtgggatttgtgctcaccgatgccaccagagctttttgccgagacgctgtgtctg
gatctcggtctgtcgggagaagccaaggcagcaatagcacacgtcattcacgaagaactc
atcagacacaagaaagaggcgattgaatcagggctcatgggagcatcgacaggccagctt
tcagacttagaccacccactgtttaacgggaaaggtccaaggaagctggagtcggtgtgg
agagagtggcatgaagcagacgagtatattccacgattgaactattacgcagctgcagac
attgagaagcgtgagcttgagagggaaaagtcaaccaggcgcatgcgcagagacatatcg
aaaccgggtacagggtttgggtcgagacgcagatatggccgctaa
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