Wallemia ichthyophaga: J056_000215
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Entry
J056_000215 CDS
T03457
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
wic
Wallemia ichthyophaga
Pathway
wic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
J056_000215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wic03019
]
J056_000215
Messenger RNA biogenesis [BR:
wic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
J056_000215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
HBS1_N
MMR_HSR1
GTP_EFTU_D2
GTP_EFTU_D3
DO-GTPase2
SpoIVA_ATPase
MobB
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
20373167
NCBI-ProteinID:
XP_009265888
UniProt:
R9AS49
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MSRHRYVRNMNLDDELDDGGFSDEYDDDTQDQVVYEGITEDQLDQLYAGLDSIRDSIPDS
TSSDREVKDALWYFYFDVEKSLNWILEESSRRADAQRKKKEKGELSSLPLDPHPSNYPTL
HLDEAPLSALKRLAIARQSKSQPSSYQRQHILFTGRGRARVPLPFDVEKAIHVKPDRKVS
MVSENVAEQQRSPTSPTAPSKPMSKLAAMAATRRQQQQPQQPQQPSTPTTSKPHSHTSDA
STKPLSKLQSKVLQARAAPPPDQPPPPPRELTQAEKLFIELDTNIEKNTPSEIGNVIIKA
TSKPHEHHLASEANLWISQKGAFDGPSPDDVVLLARKGTALDKQNRTSKPNSKASTPTPG
TPRKEFANLSKDVSNLKISANSTPAPSRPSTPQIQESKKLIPRRELVEKVQKTLTSDISL
CVVGHVDAGKSTLLGRLLVELGEMTDREHEKNARNSDKQGKSSFAYAWAMDDLVEERERG
VTLDYAVTSLRTKDRLLHIVDTPGHSHLVHNMISGAQQADAALLIIDARHGEFEKGFSER
GQTREHALLVRSLGVRELGVVVNKIDATGYSQQRFDFITDSLRPFLIKNGFNKDRIQFVP
CAAMTGENVTKRSNESLCGWYKGLTVAQVLDHLEPPQRPLEAGLRLPVHNIFKGQTAIAS
GVGVTGRLCAGVVQVGEKVRCMPGDEHAIVKMIEVDEEPVPYAAAGTNVTLYLANIDPIH
LSIGSVLCSPTDLVPLATRFVAQILLFDTHIPILPGTTFEMFLHSINTSASVTKLIETVD
KNTGAVLRSKPRVLSGNTAARVEMAVGSSSLTSQSGSGMPSSNLIAIEKFSSNKDMGRIL
LRHEGETIAAGIIIDHIR
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacatcgctatgttagaaatatgaatttagatgacgaactcgacgacggtggt
ttcagcgatgagtacgatgacgacactcaagatcaagtagtttatgaaggtatcacagaa
gatcaacttgatcaattatacgctggtttagacagcatacgcgattctatccctgattct
acctcctctgaccgtgaagtcaaggacgccttgtggtacttctactttgatgttgagaaa
tcccttaattggattctcgaagaatcctctagacgcgcagacgctcagcgcaaaaagaag
gagaaaggtgagctctcttccctcccactcgacccgcatccgtccaactatcctactctt
cacctagatgaggcgcctctgtcagcacttaaaaggcttgcgattgcacgccagtcaaag
tcacagccatcgtcgtatcagcgccagcacattctcttcactggaagaggcagggcgcgt
gtacccctgccttttgatgtagagaaagctatccatgtgaaacctgataggaaggtgtct
atggtttctgaaaatgttgccgaacaacagcgatcgccgacatcgcctactgctccttct
aaacctatgtccaagttggcggctatggcagcaactagaaggcagcaacagcaaccgcag
cagcctcagcagccatccacacctacaacctctaaaccacactcgcacacctctgatgca
tccaccaaaccgctctcaaaactacagtcaaaagtccttcaagcacgcgcagctcctccg
ccagaccagccaccaccaccgccacgcgagctgactcaggccgagaaacttttcatagag
ctcgacactaatatagagaagaacactccctctgaaattggcaacgtcattattaaagca
acatcaaaaccccatgaacatcacctagcctcagaggctaatttgtggatatctcaaaaa
ggtgcattcgacggacccagtccagacgatgttgtgcttttggctcgcaaaggcacagcc
ctcgataaacagaatcgcacatccaagccaaactccaaggcatccactcccaccccaggc
acacctcggaaagagtttgcaaatctcagcaaagatgttagcaatctcaaaatctcagcc
aacagcaccccggcgccatcgcgcccatcaacaccacagattcaagaatcgaagaagcta
atcccgcgtcgagaattggtagagaaagtgcagaagacgctcaccagcgacataagtctg
tgtgtagttgggcatgttgatgcaggtaaatcaactctcctgggtcgactgcttgtcgag
cttggtgaaatgacagaccgtgaacacgagaaaaatgcgcgtaattccgacaaacaaggc
aaatcttctttcgcatatgcatgggcaatggacgatcttgtagaggagcgtgaacgaggt
gtgacactggactatgctgtgacatccctgcgcaccaaggaccgtttactgcatatagtt
gatactccaggacattcgcatcttgttcataatatgatctccggcgcgcagcaagcggat
gctgctctgcttattatcgatgctcgtcatggcgaattcgagaaagggttctcggaaaga
ggtcagactagagagcatgccctgctcgtgcgcagccttggtgtaagggagcttggtgtg
gtcgtcaataagatcgatgcgacaggctactcacagcagcggtttgacttcatcacagac
tcgcttagaccatttcttatcaagaatggtttcaataaggatcgcattcagttcgttccg
tgtgctgctatgacaggcgagaatgttacgaaacggtcaaatgagtcgctttgtgggtgg
tataagggtcttactgtcgctcaggttttggaccaccttgaaccccctcaacgtccccta
gaagccgggttgcgtttgcctgttcataacatcttcaagggccaaactgcaatagcaagt
ggggtaggtgtcactggtagattgtgcgctggtgtggtgcaggttggtgaaaaggttaga
tgcatgccgggagacgagcatgctattgtcaaaatgatcgaggtggacgaggaaccagtg
ccatacgccgctgctggtaccaatgtcacgctgtatttggcgaatattgatccaattcac
ctgagtattggctctgttctttgctcaccaaccgatcttgtcccactagcaacacgcttt
gttgcacagattctgctcttcgatacacacatccctatcctaccaggaacgacttttgag
atgttcctgcactcaatcaacacttcagccagtgtgaccaaattaattgaaacagtggac
aaaaatacaggcgctgtacttagatccaaaccgagggtcctcagtggaaatacagcagca
cgtgtagaaatggcggttggatcaagctccctcacatcgcaatcgggcagtggaatgcct
tctagcaatctcattgcgattgaaaaattcagctctaataaggatatgggtaggatactg
ctccgtcacgaaggcgagacaatagcagctggtatcataatcgatcatattcgttaa
DBGET
integrated database retrieval system
